Protein–RNA interactions for Protein: Q96FV3

TSPAN17, Tetraspanin-17, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17Q96FV3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TSPAN17Q96FV3 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TSPAN17Q96FV3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TSPAN17Q96FV3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TSPAN17Q96FV3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.74■■□□□ 1.07
TSPAN17Q96FV3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TSPAN17Q96FV3 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TSPAN17Q96FV3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TSPAN17Q96FV3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TSPAN17Q96FV3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.73■■□□□ 1.07
TSPAN17Q96FV3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TSPAN17Q96FV3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TSPAN17Q96FV3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
TSPAN17Q96FV3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.73■■□□□ 1.07
TSPAN17Q96FV3 AL499627.2-201ENST00000606283 725 ntBASIC21.73■■□□□ 1.07
TSPAN17Q96FV3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TSPAN17Q96FV3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.73■■□□□ 1.07
TSPAN17Q96FV3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TSPAN17Q96FV3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
TSPAN17Q96FV3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TSPAN17Q96FV3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.73■■□□□ 1.07
TSPAN17Q96FV3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.73■■□□□ 1.07
TSPAN17Q96FV3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.72■■□□□ 1.07
TSPAN17Q96FV3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.72■■□□□ 1.07
TSPAN17Q96FV3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TSPAN17Q96FV3 CLDN5-201ENST00000403084 2357 ntBASIC21.72■■□□□ 1.07
TSPAN17Q96FV3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.72■■□□□ 1.07
TSPAN17Q96FV3 KRT16P3-201ENST00000439127 1283 ntBASIC21.72■■□□□ 1.07
TSPAN17Q96FV3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TSPAN17Q96FV3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.72■■□□□ 1.07
TSPAN17Q96FV3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.72■■□□□ 1.07
TSPAN17Q96FV3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TSPAN17Q96FV3 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TSPAN17Q96FV3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TSPAN17Q96FV3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.72■■□□□ 1.07
TSPAN17Q96FV3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.71■■□□□ 1.07
TSPAN17Q96FV3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TSPAN17Q96FV3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TSPAN17Q96FV3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TSPAN17Q96FV3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TSPAN17Q96FV3 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
TSPAN17Q96FV3 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.71■■□□□ 1.07
TSPAN17Q96FV3 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.71■■□□□ 1.07
TSPAN17Q96FV3 CA15P2-201ENST00000611168 834 ntBASIC21.71■■□□□ 1.07
TSPAN17Q96FV3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TSPAN17Q96FV3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TSPAN17Q96FV3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TSPAN17Q96FV3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TSPAN17Q96FV3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TSPAN17Q96FV3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
TSPAN17Q96FV3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TSPAN17Q96FV3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TSPAN17Q96FV3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.7■■□□□ 1.06
TSPAN17Q96FV3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TSPAN17Q96FV3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.7■■□□□ 1.06
TSPAN17Q96FV3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TSPAN17Q96FV3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.7■■□□□ 1.06
TSPAN17Q96FV3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
TSPAN17Q96FV3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TSPAN17Q96FV3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TSPAN17Q96FV3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
TSPAN17Q96FV3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
TSPAN17Q96FV3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TSPAN17Q96FV3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
TSPAN17Q96FV3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TSPAN17Q96FV3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TSPAN17Q96FV3 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.69■■□□□ 1.06
TSPAN17Q96FV3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TSPAN17Q96FV3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TSPAN17Q96FV3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TSPAN17Q96FV3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
TSPAN17Q96FV3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.69■■□□□ 1.06
TSPAN17Q96FV3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TSPAN17Q96FV3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.69■■□□□ 1.06
TSPAN17Q96FV3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
TSPAN17Q96FV3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.69■■□□□ 1.06
TSPAN17Q96FV3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.69■■□□□ 1.06
TSPAN17Q96FV3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TSPAN17Q96FV3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.68■■□□□ 1.06
TSPAN17Q96FV3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
TSPAN17Q96FV3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TSPAN17Q96FV3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TSPAN17Q96FV3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TSPAN17Q96FV3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
TSPAN17Q96FV3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.68■■□□□ 1.06
TSPAN17Q96FV3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TSPAN17Q96FV3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.68■■□□□ 1.06
TSPAN17Q96FV3 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TSPAN17Q96FV3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TSPAN17Q96FV3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
TSPAN17Q96FV3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.68■■□□□ 1.06
TSPAN17Q96FV3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TSPAN17Q96FV3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TSPAN17Q96FV3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.67■■□□□ 1.06
TSPAN17Q96FV3 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.67■■□□□ 1.06
TSPAN17Q96FV3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TSPAN17Q96FV3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.67■■□□□ 1.06
TSPAN17Q96FV3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TSPAN17Q96FV3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
TSPAN17Q96FV3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms