Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
USP6NLQ92738 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC25.02■■□□□ 1.6
USP6NLQ92738 ESRRAP2-201ENST00000418437 1549 ntBASIC25.02■■□□□ 1.6
USP6NLQ92738 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
USP6NLQ92738 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
USP6NLQ92738 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC25.02■■□□□ 1.6
USP6NLQ92738 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC25.02■■□□□ 1.6
USP6NLQ92738 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC25.02■■□□□ 1.6
USP6NLQ92738 MIR663A-201ENST00000385250 93 ntBASIC25.02■■□□□ 1.6
USP6NLQ92738 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC25.02■■□□□ 1.6
USP6NLQ92738 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
USP6NLQ92738 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
USP6NLQ92738 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
USP6NLQ92738 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.01■■□□□ 1.59
USP6NLQ92738 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
USP6NLQ92738 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
USP6NLQ92738 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.01■■□□□ 1.59
USP6NLQ92738 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
USP6NLQ92738 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
USP6NLQ92738 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
USP6NLQ92738 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC25.01■■□□□ 1.59
USP6NLQ92738 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC25.01■■□□□ 1.59
USP6NLQ92738 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC25.01■■□□□ 1.59
USP6NLQ92738 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
USP6NLQ92738 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
USP6NLQ92738 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC25■■□□□ 1.59
USP6NLQ92738 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
USP6NLQ92738 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25■■□□□ 1.59
USP6NLQ92738 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
USP6NLQ92738 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC25■■□□□ 1.59
USP6NLQ92738 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC25■■□□□ 1.59
USP6NLQ92738 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC25■■□□□ 1.59
USP6NLQ92738 WT1-AS_3.1-201ENST00000613262 234 ntBASIC25■■□□□ 1.59
USP6NLQ92738 GAMT-205ENST00000640762 751 ntTSL 5 BASIC25■■□□□ 1.59
USP6NLQ92738 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC25■■□□□ 1.59
USP6NLQ92738 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
USP6NLQ92738 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
USP6NLQ92738 AC138932.3-201ENST00000567634 1902 ntBASIC25■■□□□ 1.59
USP6NLQ92738 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
USP6NLQ92738 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
USP6NLQ92738 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
USP6NLQ92738 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
USP6NLQ92738 GPX1P1-201ENST00000388829 606 ntBASIC24.99■■□□□ 1.59
USP6NLQ92738 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC24.99■■□□□ 1.59
USP6NLQ92738 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
USP6NLQ92738 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC24.99■■□□□ 1.59
USP6NLQ92738 AC142086.2-201ENST00000569753 217 ntBASIC24.99■■□□□ 1.59
USP6NLQ92738 MDK-213ENST00000617138 635 ntTSL 2 BASIC24.99■■□□□ 1.59
USP6NLQ92738 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.98■■□□□ 1.59
USP6NLQ92738 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
USP6NLQ92738 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
USP6NLQ92738 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
USP6NLQ92738 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
USP6NLQ92738 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
USP6NLQ92738 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
USP6NLQ92738 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC24.98■■□□□ 1.59
USP6NLQ92738 MFSD11-216ENST00000590393 1141 ntBASIC24.98■■□□□ 1.59
USP6NLQ92738 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
USP6NLQ92738 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
USP6NLQ92738 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
USP6NLQ92738 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
USP6NLQ92738 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
USP6NLQ92738 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC24.97■■□□□ 1.59
USP6NLQ92738 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC24.97■■□□□ 1.59
USP6NLQ92738 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC24.97■■□□□ 1.59
USP6NLQ92738 AC079140.4-201ENST00000507448 529 ntBASIC24.97■■□□□ 1.59
USP6NLQ92738 TMEM191A-211ENST00000637163 1067 ntBASIC24.97■■□□□ 1.59
USP6NLQ92738 AC079630.1-202ENST00000618127 1840 ntBASIC24.97■■□□□ 1.59
USP6NLQ92738 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
USP6NLQ92738 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
USP6NLQ92738 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
USP6NLQ92738 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
USP6NLQ92738 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
USP6NLQ92738 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
USP6NLQ92738 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC24.96■■□□□ 1.59
USP6NLQ92738 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC24.96■■□□□ 1.59
USP6NLQ92738 AL050303.2-201ENST00000619798 666 ntBASIC24.96■■□□□ 1.59
USP6NLQ92738 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
USP6NLQ92738 MED17-227ENST00000640521 2047 ntTSL 5 BASIC24.95■■□□□ 1.58
USP6NLQ92738 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
USP6NLQ92738 AC142381.3-201ENST00000568208 1670 ntBASIC24.95■■□□□ 1.58
USP6NLQ92738 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
USP6NLQ92738 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC24.95■■□□□ 1.58
USP6NLQ92738 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC24.95■■□□□ 1.58
USP6NLQ92738 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC24.95■■□□□ 1.58
USP6NLQ92738 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC24.95■■□□□ 1.58
USP6NLQ92738 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC24.95■■□□□ 1.58
USP6NLQ92738 AC087239.1-201ENST00000622671 572 ntBASIC24.95■■□□□ 1.58
USP6NLQ92738 OXCT2P1-201ENST00000447263 1535 ntBASIC24.95■■□□□ 1.58
USP6NLQ92738 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC24.95■■□□□ 1.58
USP6NLQ92738 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
USP6NLQ92738 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
USP6NLQ92738 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
USP6NLQ92738 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
USP6NLQ92738 EED-207ENST00000528180 1745 ntTSL 5 BASIC24.94■■□□□ 1.58
USP6NLQ92738 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
USP6NLQ92738 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.93■■□□□ 1.58
USP6NLQ92738 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
USP6NLQ92738 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
USP6NLQ92738 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC24.93■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms