Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC24.03■■□□□ 1.44
TMEM40Q8WWA1 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
TMEM40Q8WWA1 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TMEM40Q8WWA1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
TMEM40Q8WWA1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
TMEM40Q8WWA1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC24.02■■□□□ 1.44
TMEM40Q8WWA1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TMEM40Q8WWA1 BX005040.4-201ENST00000637145 1518 ntBASIC24.02■■□□□ 1.44
TMEM40Q8WWA1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TMEM40Q8WWA1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TMEM40Q8WWA1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TMEM40Q8WWA1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC24.02■■□□□ 1.44
TMEM40Q8WWA1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC24.02■■□□□ 1.44
TMEM40Q8WWA1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC24.02■■□□□ 1.44
TMEM40Q8WWA1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC24.02■■□□□ 1.44
TMEM40Q8WWA1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC24.02■■□□□ 1.44
TMEM40Q8WWA1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC24.02■■□□□ 1.44
TMEM40Q8WWA1 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TMEM40Q8WWA1 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TMEM40Q8WWA1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC24.01■■□□□ 1.43
TMEM40Q8WWA1 DUSP8P3-201ENST00000399571 1760 ntBASIC24.01■■□□□ 1.43
TMEM40Q8WWA1 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
TMEM40Q8WWA1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TMEM40Q8WWA1 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TMEM40Q8WWA1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC24.01■■□□□ 1.43
TMEM40Q8WWA1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC24.01■■□□□ 1.43
TMEM40Q8WWA1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
TMEM40Q8WWA1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC24.01■■□□□ 1.43
TMEM40Q8WWA1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC24.01■■□□□ 1.43
TMEM40Q8WWA1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC24.01■■□□□ 1.43
TMEM40Q8WWA1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TMEM40Q8WWA1 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
TMEM40Q8WWA1 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
TMEM40Q8WWA1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
TMEM40Q8WWA1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC24■■□□□ 1.43
TMEM40Q8WWA1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
TMEM40Q8WWA1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC24■■□□□ 1.43
TMEM40Q8WWA1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC24■■□□□ 1.43
TMEM40Q8WWA1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
TMEM40Q8WWA1 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC24■■□□□ 1.43
TMEM40Q8WWA1 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TMEM40Q8WWA1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC24■■□□□ 1.43
TMEM40Q8WWA1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC24■■□□□ 1.43
TMEM40Q8WWA1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
TMEM40Q8WWA1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
TMEM40Q8WWA1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
TMEM40Q8WWA1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC23.99■■□□□ 1.43
TMEM40Q8WWA1 AC092068.2-201ENST00000590491 1708 ntBASIC23.99■■□□□ 1.43
TMEM40Q8WWA1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.99■■□□□ 1.43
TMEM40Q8WWA1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.99■■□□□ 1.43
TMEM40Q8WWA1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.99■■□□□ 1.43
TMEM40Q8WWA1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC23.99■■□□□ 1.43
TMEM40Q8WWA1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
TMEM40Q8WWA1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
TMEM40Q8WWA1 OXCT2P1-201ENST00000447263 1535 ntBASIC23.99■■□□□ 1.43
TMEM40Q8WWA1 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TMEM40Q8WWA1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TMEM40Q8WWA1 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
TMEM40Q8WWA1 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TMEM40Q8WWA1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC23.98■■□□□ 1.43
TMEM40Q8WWA1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC23.98■■□□□ 1.43
TMEM40Q8WWA1 AC087239.1-201ENST00000622671 572 ntBASIC23.98■■□□□ 1.43
TMEM40Q8WWA1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TMEM40Q8WWA1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TMEM40Q8WWA1 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
TMEM40Q8WWA1 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
TMEM40Q8WWA1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.97■■□□□ 1.43
TMEM40Q8WWA1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.97■■□□□ 1.43
TMEM40Q8WWA1 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.97■■□□□ 1.43
TMEM40Q8WWA1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.97■■□□□ 1.43
TMEM40Q8WWA1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.97■■□□□ 1.43
TMEM40Q8WWA1 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC23.97■■□□□ 1.43
TMEM40Q8WWA1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.97■■□□□ 1.43
TMEM40Q8WWA1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC23.97■■□□□ 1.43
TMEM40Q8WWA1 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
TMEM40Q8WWA1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TMEM40Q8WWA1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.96■■□□□ 1.43
TMEM40Q8WWA1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TMEM40Q8WWA1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.96■■□□□ 1.43
TMEM40Q8WWA1 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.96■■□□□ 1.43
TMEM40Q8WWA1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.96■■□□□ 1.43
TMEM40Q8WWA1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
TMEM40Q8WWA1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC23.96■■□□□ 1.43
TMEM40Q8WWA1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC23.96■■□□□ 1.43
TMEM40Q8WWA1 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC23.96■■□□□ 1.43
TMEM40Q8WWA1 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
TMEM40Q8WWA1 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.95■■□□□ 1.42
TMEM40Q8WWA1 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TMEM40Q8WWA1 AP004607.4-201ENST00000530158 1459 ntBASIC23.95■■□□□ 1.42
TMEM40Q8WWA1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.95■■□□□ 1.42
TMEM40Q8WWA1 AC004854.2-201ENST00000608450 1441 ntBASIC23.95■■□□□ 1.42
TMEM40Q8WWA1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
TMEM40Q8WWA1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.95■■□□□ 1.42
TMEM40Q8WWA1 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
TMEM40Q8WWA1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TMEM40Q8WWA1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC23.95■■□□□ 1.42
TMEM40Q8WWA1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
TMEM40Q8WWA1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
TMEM40Q8WWA1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.95■■□□□ 1.42
TMEM40Q8WWA1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms