Protein–RNA interactions for Protein: Q8NCS7

SLC44A5, Choline transporter-like protein 5, humanhuman

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A5Q8NCS7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC25.91■■□□□ 1.74
SLC44A5Q8NCS7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC25.91■■□□□ 1.74
SLC44A5Q8NCS7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC25.91■■□□□ 1.74
SLC44A5Q8NCS7 KRT18P5-201ENST00000436075 1291 ntBASIC25.91■■□□□ 1.74
SLC44A5Q8NCS7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC25.91■■□□□ 1.74
SLC44A5Q8NCS7 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SLC44A5Q8NCS7 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SLC44A5Q8NCS7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC25.9■■□□□ 1.74
SLC44A5Q8NCS7 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SLC44A5Q8NCS7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SLC44A5Q8NCS7 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC25.9■■□□□ 1.74
SLC44A5Q8NCS7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
SLC44A5Q8NCS7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC25.9■■□□□ 1.74
SLC44A5Q8NCS7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
SLC44A5Q8NCS7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SLC44A5Q8NCS7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SLC44A5Q8NCS7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC25.9■■□□□ 1.74
SLC44A5Q8NCS7 THRA-202ENST00000394121 2260 ntTSL 2 BASIC25.9■■□□□ 1.74
SLC44A5Q8NCS7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SLC44A5Q8NCS7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC25.9■■□□□ 1.74
SLC44A5Q8NCS7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SLC44A5Q8NCS7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC25.89■■□□□ 1.74
SLC44A5Q8NCS7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC25.89■■□□□ 1.74
SLC44A5Q8NCS7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
SLC44A5Q8NCS7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
SLC44A5Q8NCS7 AC010141.3-201ENST00000456659 717 ntBASIC25.89■■□□□ 1.74
SLC44A5Q8NCS7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
SLC44A5Q8NCS7 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC25.89■■□□□ 1.74
SLC44A5Q8NCS7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
SLC44A5Q8NCS7 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
SLC44A5Q8NCS7 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
SLC44A5Q8NCS7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC25.88■■□□□ 1.73
SLC44A5Q8NCS7 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SLC44A5Q8NCS7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SLC44A5Q8NCS7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
SLC44A5Q8NCS7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
SLC44A5Q8NCS7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC25.88■■□□□ 1.73
SLC44A5Q8NCS7 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SLC44A5Q8NCS7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SLC44A5Q8NCS7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC25.88■■□□□ 1.73
SLC44A5Q8NCS7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC25.88■■□□□ 1.73
SLC44A5Q8NCS7 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC25.88■■□□□ 1.73
SLC44A5Q8NCS7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
SLC44A5Q8NCS7 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SLC44A5Q8NCS7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC25.88■■□□□ 1.73
SLC44A5Q8NCS7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SLC44A5Q8NCS7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC25.88■■□□□ 1.73
SLC44A5Q8NCS7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SLC44A5Q8NCS7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SLC44A5Q8NCS7 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SLC44A5Q8NCS7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC25.87■■□□□ 1.73
SLC44A5Q8NCS7 TERF1P2-201ENST00000583350 1212 ntBASIC25.87■■□□□ 1.73
SLC44A5Q8NCS7 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC25.87■■□□□ 1.73
SLC44A5Q8NCS7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
SLC44A5Q8NCS7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SLC44A5Q8NCS7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SLC44A5Q8NCS7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SLC44A5Q8NCS7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SLC44A5Q8NCS7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SLC44A5Q8NCS7 SMUG1P1-201ENST00000590640 811 ntBASIC25.86■■□□□ 1.73
SLC44A5Q8NCS7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC25.86■■□□□ 1.73
SLC44A5Q8NCS7 AC068587.7-201ENST00000641602 218 ntBASIC25.86■■□□□ 1.73
SLC44A5Q8NCS7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SLC44A5Q8NCS7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SLC44A5Q8NCS7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
SLC44A5Q8NCS7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
SLC44A5Q8NCS7 LINC02228-203ENST00000641970 1355 ntBASIC25.85■■□□□ 1.73
SLC44A5Q8NCS7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC25.85■■□□□ 1.73
SLC44A5Q8NCS7 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
SLC44A5Q8NCS7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC25.85■■□□□ 1.73
SLC44A5Q8NCS7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC25.85■■□□□ 1.73
SLC44A5Q8NCS7 KRT18P14-201ENST00000534205 1250 ntBASIC25.85■■□□□ 1.73
SLC44A5Q8NCS7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC25.85■■□□□ 1.73
SLC44A5Q8NCS7 IKBKGP1-201ENST00000612193 1073 ntBASIC25.85■■□□□ 1.73
SLC44A5Q8NCS7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SLC44A5Q8NCS7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC25.85■■□□□ 1.73
SLC44A5Q8NCS7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SLC44A5Q8NCS7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC25.84■■□□□ 1.73
SLC44A5Q8NCS7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC25.84■■□□□ 1.73
SLC44A5Q8NCS7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC25.84■■□□□ 1.73
SLC44A5Q8NCS7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC25.84■■□□□ 1.73
SLC44A5Q8NCS7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SLC44A5Q8NCS7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SLC44A5Q8NCS7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC25.83■■□□□ 1.73
SLC44A5Q8NCS7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
SLC44A5Q8NCS7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SLC44A5Q8NCS7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SLC44A5Q8NCS7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
SLC44A5Q8NCS7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC25.83■■□□□ 1.73
SLC44A5Q8NCS7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SLC44A5Q8NCS7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
SLC44A5Q8NCS7 TPRG1LP1-201ENST00000598702 760 ntBASIC25.83■■□□□ 1.73
SLC44A5Q8NCS7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SLC44A5Q8NCS7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC25.82■■□□□ 1.72
SLC44A5Q8NCS7 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
SLC44A5Q8NCS7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.82■■□□□ 1.72
SLC44A5Q8NCS7 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SLC44A5Q8NCS7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC25.82■■□□□ 1.72
SLC44A5Q8NCS7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
SLC44A5Q8NCS7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms