Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTCHD4Q6ZW05 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTCHD4Q6ZW05 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.09■□□□□ 0.81
PTCHD4Q6ZW05 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.09■□□□□ 0.81
PTCHD4Q6ZW05 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.09■□□□□ 0.81
PTCHD4Q6ZW05 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
PTCHD4Q6ZW05 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
PTCHD4Q6ZW05 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
PTCHD4Q6ZW05 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.09■□□□□ 0.81
PTCHD4Q6ZW05 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTCHD4Q6ZW05 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.09■□□□□ 0.81
PTCHD4Q6ZW05 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.09■□□□□ 0.81
PTCHD4Q6ZW05 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTCHD4Q6ZW05 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.08■□□□□ 0.81
PTCHD4Q6ZW05 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
PTCHD4Q6ZW05 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTCHD4Q6ZW05 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTCHD4Q6ZW05 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.08■□□□□ 0.81
PTCHD4Q6ZW05 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.08■□□□□ 0.81
PTCHD4Q6ZW05 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.08■□□□□ 0.81
PTCHD4Q6ZW05 AC137630.3-201ENST00000607245 391 ntBASIC20.08■□□□□ 0.81
PTCHD4Q6ZW05 AL031848.2-201ENST00000607670 837 ntBASIC20.08■□□□□ 0.81
PTCHD4Q6ZW05 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.08■□□□□ 0.81
PTCHD4Q6ZW05 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PTCHD4Q6ZW05 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PTCHD4Q6ZW05 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
PTCHD4Q6ZW05 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
PTCHD4Q6ZW05 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
PTCHD4Q6ZW05 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
PTCHD4Q6ZW05 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.08■□□□□ 0.8
PTCHD4Q6ZW05 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTCHD4Q6ZW05 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTCHD4Q6ZW05 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.07■□□□□ 0.8
PTCHD4Q6ZW05 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PTCHD4Q6ZW05 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
PTCHD4Q6ZW05 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PTCHD4Q6ZW05 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTCHD4Q6ZW05 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.07■□□□□ 0.8
PTCHD4Q6ZW05 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
PTCHD4Q6ZW05 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PTCHD4Q6ZW05 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTCHD4Q6ZW05 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.07■□□□□ 0.8
PTCHD4Q6ZW05 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTCHD4Q6ZW05 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.06■□□□□ 0.8
PTCHD4Q6ZW05 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PTCHD4Q6ZW05 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.06■□□□□ 0.8
PTCHD4Q6ZW05 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.06■□□□□ 0.8
PTCHD4Q6ZW05 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTCHD4Q6ZW05 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.06■□□□□ 0.8
PTCHD4Q6ZW05 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.06■□□□□ 0.8
PTCHD4Q6ZW05 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.06■□□□□ 0.8
PTCHD4Q6ZW05 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTCHD4Q6ZW05 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTCHD4Q6ZW05 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.06■□□□□ 0.8
PTCHD4Q6ZW05 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
PTCHD4Q6ZW05 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTCHD4Q6ZW05 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTCHD4Q6ZW05 AC026310.3-201ENST00000625186 2373 ntBASIC20.05■□□□□ 0.8
PTCHD4Q6ZW05 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.05■□□□□ 0.8
PTCHD4Q6ZW05 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTCHD4Q6ZW05 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.05■□□□□ 0.8
PTCHD4Q6ZW05 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTCHD4Q6ZW05 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTCHD4Q6ZW05 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PTCHD4Q6ZW05 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PTCHD4Q6ZW05 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTCHD4Q6ZW05 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTCHD4Q6ZW05 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
PTCHD4Q6ZW05 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTCHD4Q6ZW05 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.04■□□□□ 0.8
PTCHD4Q6ZW05 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PTCHD4Q6ZW05 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.04■□□□□ 0.8
PTCHD4Q6ZW05 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PTCHD4Q6ZW05 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTCHD4Q6ZW05 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTCHD4Q6ZW05 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTCHD4Q6ZW05 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.03■□□□□ 0.8
PTCHD4Q6ZW05 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTCHD4Q6ZW05 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PTCHD4Q6ZW05 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
PTCHD4Q6ZW05 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.03■□□□□ 0.8
PTCHD4Q6ZW05 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.03■□□□□ 0.8
PTCHD4Q6ZW05 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PTCHD4Q6ZW05 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.03■□□□□ 0.8
PTCHD4Q6ZW05 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTCHD4Q6ZW05 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PTCHD4Q6ZW05 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTCHD4Q6ZW05 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.02■□□□□ 0.8
PTCHD4Q6ZW05 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTCHD4Q6ZW05 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTCHD4Q6ZW05 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.02■□□□□ 0.8
PTCHD4Q6ZW05 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTCHD4Q6ZW05 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTCHD4Q6ZW05 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTCHD4Q6ZW05 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PTCHD4Q6ZW05 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTCHD4Q6ZW05 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PTCHD4Q6ZW05 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.02■□□□□ 0.79
PTCHD4Q6ZW05 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.02■□□□□ 0.79
PTCHD4Q6ZW05 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms