Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
RC3H1Q5TC82 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC28.01■■■□□ 2.07
RC3H1Q5TC82 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC28.01■■■□□ 2.07
RC3H1Q5TC82 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC28.01■■■□□ 2.07
RC3H1Q5TC82 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC28.01■■■□□ 2.07
RC3H1Q5TC82 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC28.01■■■□□ 2.07
RC3H1Q5TC82 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
RC3H1Q5TC82 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
RC3H1Q5TC82 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
RC3H1Q5TC82 EED-207ENST00000528180 1745 ntTSL 5 BASIC28.01■■■□□ 2.07
RC3H1Q5TC82 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
RC3H1Q5TC82 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC28■■■□□ 2.07
RC3H1Q5TC82 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC28■■■□□ 2.07
RC3H1Q5TC82 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC28■■■□□ 2.07
RC3H1Q5TC82 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC28■■■□□ 2.07
RC3H1Q5TC82 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC28■■■□□ 2.07
RC3H1Q5TC82 CD99P1-205ENST00000527459 561 ntBASIC28■■■□□ 2.07
RC3H1Q5TC82 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC28■■■□□ 2.07
RC3H1Q5TC82 AL050303.2-201ENST00000619798 666 ntBASIC28■■■□□ 2.07
RC3H1Q5TC82 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
RC3H1Q5TC82 AC138932.3-201ENST00000567634 1902 ntBASIC28■■■□□ 2.07
RC3H1Q5TC82 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC28■■■□□ 2.07
RC3H1Q5TC82 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC28■■■□□ 2.07
RC3H1Q5TC82 AC142381.3-201ENST00000568208 1670 ntBASIC28■■■□□ 2.07
RC3H1Q5TC82 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
RC3H1Q5TC82 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC27.99■■■□□ 2.07
RC3H1Q5TC82 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC27.99■■■□□ 2.07
RC3H1Q5TC82 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC27.99■■■□□ 2.07
RC3H1Q5TC82 AL121832.2-201ENST00000610979 668 ntBASIC27.99■■■□□ 2.07
RC3H1Q5TC82 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
RC3H1Q5TC82 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
RC3H1Q5TC82 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC27.98■■■□□ 2.07
RC3H1Q5TC82 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
RC3H1Q5TC82 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC27.98■■■□□ 2.07
RC3H1Q5TC82 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC27.98■■■□□ 2.07
RC3H1Q5TC82 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
RC3H1Q5TC82 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC27.98■■■□□ 2.07
RC3H1Q5TC82 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
RC3H1Q5TC82 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC27.97■■■□□ 2.07
RC3H1Q5TC82 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
RC3H1Q5TC82 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC27.97■■■□□ 2.07
RC3H1Q5TC82 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC27.97■■■□□ 2.07
RC3H1Q5TC82 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC27.97■■■□□ 2.07
RC3H1Q5TC82 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC27.97■■■□□ 2.07
RC3H1Q5TC82 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC27.97■■■□□ 2.07
RC3H1Q5TC82 ASL-203ENST00000380839 1765 ntTSL 5 BASIC27.96■■■□□ 2.07
RC3H1Q5TC82 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC27.96■■■□□ 2.07
RC3H1Q5TC82 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC27.96■■■□□ 2.07
RC3H1Q5TC82 TSPY6P-201ENST00000448518 926 ntBASIC27.96■■■□□ 2.07
RC3H1Q5TC82 AC083906.2-201ENST00000511578 360 ntBASIC27.96■■■□□ 2.07
RC3H1Q5TC82 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC27.96■■■□□ 2.07
RC3H1Q5TC82 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
RC3H1Q5TC82 USP45-205ENST00000472914 1617 ntTSL 5 BASIC27.96■■■□□ 2.07
RC3H1Q5TC82 MED17-227ENST00000640521 2047 ntTSL 5 BASIC27.96■■■□□ 2.07
RC3H1Q5TC82 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC27.95■■■□□ 2.07
RC3H1Q5TC82 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
RC3H1Q5TC82 APTR-205ENST00000447009 902 ntTSL 2 BASIC27.95■■■□□ 2.06
RC3H1Q5TC82 DUX4L16-201ENST00000555130 1264 ntBASIC27.95■■■□□ 2.06
RC3H1Q5TC82 AC231657.2-201ENST00000624556 255 ntBASIC27.95■■■□□ 2.06
RC3H1Q5TC82 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC27.95■■■□□ 2.06
RC3H1Q5TC82 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC27.95■■■□□ 2.06
RC3H1Q5TC82 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
RC3H1Q5TC82 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
RC3H1Q5TC82 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC27.95■■■□□ 2.06
RC3H1Q5TC82 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC27.94■■■□□ 2.06
RC3H1Q5TC82 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC27.94■■■□□ 2.06
RC3H1Q5TC82 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
RC3H1Q5TC82 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC27.94■■■□□ 2.06
RC3H1Q5TC82 GUSBP6-202ENST00000438529 1198 ntBASIC27.94■■■□□ 2.06
RC3H1Q5TC82 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC27.94■■■□□ 2.06
RC3H1Q5TC82 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC27.94■■■□□ 2.06
RC3H1Q5TC82 MAZ-216ENST00000616501 991 ntTSL 5 BASIC27.94■■■□□ 2.06
RC3H1Q5TC82 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC27.94■■■□□ 2.06
RC3H1Q5TC82 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC27.94■■■□□ 2.06
RC3H1Q5TC82 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
RC3H1Q5TC82 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
RC3H1Q5TC82 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
RC3H1Q5TC82 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
RC3H1Q5TC82 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
RC3H1Q5TC82 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
RC3H1Q5TC82 SLC7A5P2-201ENST00000553010 536 ntBASIC27.93■■■□□ 2.06
RC3H1Q5TC82 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC27.93■■■□□ 2.06
RC3H1Q5TC82 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
RC3H1Q5TC82 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
RC3H1Q5TC82 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
RC3H1Q5TC82 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
RC3H1Q5TC82 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC27.92■■■□□ 2.06
RC3H1Q5TC82 AC005224.4-201ENST00000583262 1652 ntBASIC27.92■■■□□ 2.06
RC3H1Q5TC82 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
RC3H1Q5TC82 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC27.92■■■□□ 2.06
RC3H1Q5TC82 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
RC3H1Q5TC82 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
RC3H1Q5TC82 AC104187.1-201ENST00000607510 612 ntBASIC27.92■■■□□ 2.06
RC3H1Q5TC82 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
RC3H1Q5TC82 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
RC3H1Q5TC82 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
RC3H1Q5TC82 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC27.91■■■□□ 2.06
RC3H1Q5TC82 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC27.91■■■□□ 2.06
RC3H1Q5TC82 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
RC3H1Q5TC82 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC27.91■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms