Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SYCNQ0VAF6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SYCNQ0VAF6 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SYCNQ0VAF6 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC14.44□□□□□ -0.1
SYCNQ0VAF6 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
SYCNQ0VAF6 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SYCNQ0VAF6 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SYCNQ0VAF6 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SYCNQ0VAF6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SYCNQ0VAF6 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SYCNQ0VAF6 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SYCNQ0VAF6 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SYCNQ0VAF6 AC242852.2-201ENST00000615738 1807 ntBASIC14.43□□□□□ -0.1
SYCNQ0VAF6 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SYCNQ0VAF6 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SYCNQ0VAF6 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SYCNQ0VAF6 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SYCNQ0VAF6 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SYCNQ0VAF6 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SYCNQ0VAF6 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SYCNQ0VAF6 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC14.43□□□□□ -0.1
SYCNQ0VAF6 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SYCNQ0VAF6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SYCNQ0VAF6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC14.43□□□□□ -0.1
SYCNQ0VAF6 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SYCNQ0VAF6 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SYCNQ0VAF6 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SYCNQ0VAF6 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SYCNQ0VAF6 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SYCNQ0VAF6 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SYCNQ0VAF6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SYCNQ0VAF6 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SYCNQ0VAF6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC14.42□□□□□ -0.1
SYCNQ0VAF6 AC004687.1-201ENST00000579003 1625 ntBASIC14.42□□□□□ -0.1
SYCNQ0VAF6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC14.42□□□□□ -0.1
SYCNQ0VAF6 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SYCNQ0VAF6 ECEL1P1-201ENST00000373592 1742 ntBASIC14.42□□□□□ -0.1
SYCNQ0VAF6 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC14.42□□□□□ -0.1
SYCNQ0VAF6 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC14.42□□□□□ -0.1
SYCNQ0VAF6 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SYCNQ0VAF6 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SYCNQ0VAF6 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SYCNQ0VAF6 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SYCNQ0VAF6 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
SYCNQ0VAF6 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SYCNQ0VAF6 LINC01960-201ENST00000563759 1884 ntBASIC14.42□□□□□ -0.1
SYCNQ0VAF6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC14.41□□□□□ -0.1
SYCNQ0VAF6 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC14.41□□□□□ -0.1
SYCNQ0VAF6 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SYCNQ0VAF6 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SYCNQ0VAF6 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC14.41□□□□□ -0.1
SYCNQ0VAF6 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SYCNQ0VAF6 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SYCNQ0VAF6 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SYCNQ0VAF6 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SYCNQ0VAF6 MIR3621-201ENST00000580529 85 ntBASIC14.41□□□□□ -0.1
SYCNQ0VAF6 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC14.41□□□□□ -0.1
SYCNQ0VAF6 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SYCNQ0VAF6 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SYCNQ0VAF6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SYCNQ0VAF6 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SYCNQ0VAF6 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SYCNQ0VAF6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SYCNQ0VAF6 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC14.41□□□□□ -0.1
SYCNQ0VAF6 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SYCNQ0VAF6 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SYCNQ0VAF6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC14.4□□□□□ -0.1
SYCNQ0VAF6 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SYCNQ0VAF6 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SYCNQ0VAF6 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SYCNQ0VAF6 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SYCNQ0VAF6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SYCNQ0VAF6 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SYCNQ0VAF6 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SYCNQ0VAF6 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SYCNQ0VAF6 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SYCNQ0VAF6 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SYCNQ0VAF6 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SYCNQ0VAF6 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SYCNQ0VAF6 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
SYCNQ0VAF6 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SYCNQ0VAF6 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SYCNQ0VAF6 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SYCNQ0VAF6 LINC00526-201ENST00000581067 1875 ntBASIC14.4□□□□□ -0.1
SYCNQ0VAF6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SYCNQ0VAF6 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SYCNQ0VAF6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SYCNQ0VAF6 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC14.39□□□□□ -0.11
SYCNQ0VAF6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC14.39□□□□□ -0.11
SYCNQ0VAF6 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SYCNQ0VAF6 SRD5A1P1-201ENST00000442297 786 ntBASIC14.39□□□□□ -0.11
SYCNQ0VAF6 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC14.39□□□□□ -0.11
SYCNQ0VAF6 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC14.39□□□□□ -0.11
SYCNQ0VAF6 AL499627.2-201ENST00000606283 725 ntBASIC14.39□□□□□ -0.11
SYCNQ0VAF6 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SYCNQ0VAF6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
SYCNQ0VAF6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SYCNQ0VAF6 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SYCNQ0VAF6 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC14.39□□□□□ -0.11
SYCNQ0VAF6 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms