Protein–RNA interactions for Protein: Q08109

HRD1, ERAD-associated E3 ubiquitin-protein ligase HRD1, yeastyeast

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD1Q08109 BUD16YEL029C 939 nt3.12□□□□□ -1.91
HRD1Q08109 BMH1YER177W 804 nt3.12□□□□□ -1.91
HRD1Q08109 VMA22YHR060W 546 nt3.12□□□□□ -1.91
HRD1Q08109 AUR1YKL004W 1206 nt3.12□□□□□ -1.91
HRD1Q08109 RRT7YLL030C 342 nt3.12□□□□□ -1.91
HRD1Q08109 PFA4YOL003C 1137 nt3.12□□□□□ -1.91
HRD1Q08109 VID27YNL212W 2349 nt3.11□□□□□ -1.91
HRD1Q08109 ALE1YOR175C 1860 nt3.11□□□□□ -1.91
HRD1Q08109 YAK1YJL141C 2424 nt3.11□□□□□ -1.91
HRD1Q08109 DAN4YJR151C 3486 nt3.11□□□□□ -1.91
HRD1Q08109 QRI7YDL104C 1224 nt3.11□□□□□ -1.91
HRD1Q08109 UIP3YAR027W 708 nt3.11□□□□□ -1.91
HRD1Q08109 ECM16YMR128W 3804 nt3.11□□□□□ -1.91
HRD1Q08109 PHA2YNL316C 1005 nt3.11□□□□□ -1.91
HRD1Q08109 LDS2YOL047C 1071 nt3.11□□□□□ -1.91
HRD1Q08109 OSW1YOR255W 837 nt3.11□□□□□ -1.91
HRD1Q08109 SPN1YPR133C 1233 nt3.11□□□□□ -1.91
HRD1Q08109 SPA2YLL021W 4401 nt3.11□□□□□ -1.91
HRD1Q08109 DEG1YFL001W 1329 nt3.11□□□□□ -1.91
HRD1Q08109 MMR1YLR190W 1476 nt3.1□□□□□ -1.91
HRD1Q08109 YDR444WYDR444W 2064 nt3.1□□□□□ -1.91
HRD1Q08109 ORC4YPR162C 1590 nt3.1□□□□□ -1.91
HRD1Q08109 YIR040CYIR040C 333 nt3.1□□□□□ -1.91
HRD1Q08109 COQ5YML110C 924 nt3.1□□□□□ -1.91
HRD1Q08109 CKS1YBR135W 453 nt3.1□□□□□ -1.91
HRD1Q08109 PPQ1YPL179W 1650 nt3.1□□□□□ -1.91
HRD1Q08109 ARX1YDR101C 1782 nt3.1□□□□□ -1.91
HRD1Q08109 NUP85YJR042W 2235 nt3.09□□□□□ -1.91
HRD1Q08109 NGL3YML118W 1518 nt3.09□□□□□ -1.91
HRD1Q08109 IMD4YML056C 1575 nt3.09□□□□□ -1.91
HRD1Q08109 YDL183CYDL183C 963 nt3.09□□□□□ -1.91
HRD1Q08109 MRPL11YDL202W 750 nt3.09□□□□□ -1.91
HRD1Q08109 RAD14YMR201C 1116 nt3.09□□□□□ -1.91
HRD1Q08109 YRB30YGL164C 1323 nt3.09□□□□□ -1.91
HRD1Q08109 ERG9YHR190W 1335 nt3.09□□□□□ -1.91
HRD1Q08109 PHO12YHR215W 1404 nt3.09□□□□□ -1.92
HRD1Q08109 PHO11YAR071W 1404 nt3.09□□□□□ -1.92
HRD1Q08109 STT4YLR305C 5703 nt3.09□□□□□ -1.92
HRD1Q08109 YPR022CYPR022C 3402 nt3.09□□□□□ -1.92
HRD1Q08109 ETP1YHL010C 1758 nt3.08□□□□□ -1.92
HRD1Q08109 PFK26YIL107C 2484 nt3.08□□□□□ -1.92
HRD1Q08109 ROD1YOR018W 2514 nt3.08□□□□□ -1.92
HRD1Q08109 FAD1YDL045C 921 nt3.08□□□□□ -1.92
HRD1Q08109 DPB4YDR121W 591 nt3.08□□□□□ -1.92
HRD1Q08109 YGL193CYGL193C 312 nt3.08□□□□□ -1.92
HRD1Q08109 RAI1YGL246C 1164 nt3.08□□□□□ -1.92
HRD1Q08109 FUR1YHR128W 651 nt3.08□□□□□ -1.92
HRD1Q08109 BAT2YJR148W 1131 nt3.08□□□□□ -1.92
HRD1Q08109 CDC73YLR418C 1182 nt3.08□□□□□ -1.92
HRD1Q08109 IST1YNL265C 897 nt3.08□□□□□ -1.92
HRD1Q08109 YOL035CYOL035C 303 nt3.08□□□□□ -1.92
HRD1Q08109 BSD2YBR290W 966 nt3.08□□□□□ -1.92
HRD1Q08109 NTA1YJR062C 1374 nt3.08□□□□□ -1.92
HRD1Q08109 SSU1YPL092W 1377 nt3.08□□□□□ -1.92
HRD1Q08109 MTR4YJL050W 3222 nt3.08□□□□□ -1.92
HRD1Q08109 RDS1YCR106W 2499 nt3.08□□□□□ -1.92
HRD1Q08109 NRP1YDL167C 2160 nt3.07□□□□□ -1.92
HRD1Q08109 RAD4YER162C 2265 nt3.07□□□□□ -1.92
HRD1Q08109 TRX3YCR083W 384 nt3.07□□□□□ -1.92
HRD1Q08109 PFA5YDR459C 1125 nt3.07□□□□□ -1.92
HRD1Q08109 RPC34YNR003C 954 nt3.07□□□□□ -1.92
HRD1Q08109 YOR008W-BYOR008W-B 102 nt3.07□□□□□ -1.92
HRD1Q08109 ARO9YHR137W 1542 nt3.07□□□□□ -1.92
HRD1Q08109 MAD3YJL013C 1548 nt3.07□□□□□ -1.92
HRD1Q08109 CDC45YLR103C 1953 nt3.07□□□□□ -1.92
HRD1Q08109 RPS18AYDR450W 441 nt3.06□□□□□ -1.92
HRD1Q08109 SMI1YGR229C 1518 nt3.06□□□□□ -1.92
HRD1Q08109 DPH1YIL103W 1278 nt3.06□□□□□ -1.92
HRD1Q08109 CDC8YJR057W 651 nt3.06□□□□□ -1.92
HRD1Q08109 MNR2YKL064W 2910 nt3.06□□□□□ -1.92
HRD1Q08109 FAS1YKL182W 6156 nt3.06□□□□□ -1.92
HRD1Q08109 IOC4YMR044W 1428 nt3.06□□□□□ -1.92
HRD1Q08109 TRI1YMR233W 681 nt3.06□□□□□ -1.92
HRD1Q08109 CIT1YNR001C 1440 nt3.06□□□□□ -1.92
HRD1Q08109 WRS1YOL097C 1299 nt3.06□□□□□ -1.92
HRD1Q08109 RPS7AYOR096W 573 nt3.06□□□□□ -1.92
HRD1Q08109 CDS1YBR029C 1374 nt3.06□□□□□ -1.92
HRD1Q08109 GLC3YEL011W 2115 nt3.05□□□□□ -1.92
HRD1Q08109 RPN5YDL147W 1338 nt3.05□□□□□ -1.92
HRD1Q08109 YEL074WYEL074W 339 nt3.05□□□□□ -1.92
HRD1Q08109 YHI9YHR029C 885 nt3.05□□□□□ -1.92
HRD1Q08109 RPS28BYLR264W 204 nt3.05□□□□□ -1.92
HRD1Q08109 PRX1YBL064C 786 nt3.05□□□□□ -1.92
HRD1Q08109 OSH3YHR073W 2991 nt3.05□□□□□ -1.92
HRD1Q08109 MDN1YLR106C 14733 nt3.04□□□□□ -1.92
HRD1Q08109 AAD3YCR107W 1092 nt3.04□□□□□ -1.92
HRD1Q08109 MGT1YDL200C 567 nt3.04□□□□□ -1.92
HRD1Q08109 SPT3YDR392W 1014 nt3.04□□□□□ -1.92
HRD1Q08109 IGO2YHR132W-A 396 nt3.04□□□□□ -1.92
HRD1Q08109 ANB1YJR047C 474 nt3.04□□□□□ -1.92
HRD1Q08109 UTP11YKL099C 753 nt3.04□□□□□ -1.92
HRD1Q08109 YPT7YML001W 627 nt3.04□□□□□ -1.92
HRD1Q08109 ATG8YBL078C 354 nt3.04□□□□□ -1.92
HRD1Q08109 ECM8YBR076W 1065 nt3.04□□□□□ -1.92
HRD1Q08109 POF1YCL047C 777 nt3.04□□□□□ -1.92
HRD1Q08109 TRS120YDR407C 3870 nt3.04□□□□□ -1.92
HRD1Q08109 UBX5YDR330W 1503 nt3.03□□□□□ -1.92
HRD1Q08109 TRP4YDR354W 1143 nt3.03□□□□□ -1.92
HRD1Q08109 USE1YGL098W 738 nt3.03□□□□□ -1.92
HRD1Q08109 URA4YLR420W 1095 nt3.03□□□□□ -1.92
Retrieved 100 of 7,029 protein–RNA pairs in 19.1 ms