Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 AC008687.6-201ENST00000596318 630 ntBASIC28.33■■■□□ 2.13
KCNQ4P56696 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC28.33■■■□□ 2.13
KCNQ4P56696 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
KCNQ4P56696 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC28.32■■■□□ 2.12
KCNQ4P56696 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC28.32■■■□□ 2.12
KCNQ4P56696 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
KCNQ4P56696 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC28.32■■■□□ 2.12
KCNQ4P56696 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC28.32■■■□□ 2.12
KCNQ4P56696 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
KCNQ4P56696 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
KCNQ4P56696 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
KCNQ4P56696 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
KCNQ4P56696 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC28.31■■■□□ 2.12
KCNQ4P56696 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC28.31■■■□□ 2.12
KCNQ4P56696 AC005181.1-201ENST00000604782 1256 ntBASIC28.31■■■□□ 2.12
KCNQ4P56696 AC104187.1-201ENST00000607510 612 ntBASIC28.31■■■□□ 2.12
KCNQ4P56696 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
KCNQ4P56696 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC28.31■■■□□ 2.12
KCNQ4P56696 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
KCNQ4P56696 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
KCNQ4P56696 ASL-203ENST00000380839 1765 ntTSL 5 BASIC28.3■■■□□ 2.12
KCNQ4P56696 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC28.3■■■□□ 2.12
KCNQ4P56696 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
KCNQ4P56696 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC28.3■■■□□ 2.12
KCNQ4P56696 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC28.3■■■□□ 2.12
KCNQ4P56696 CPT2-209ENST00000636935 803 ntTSL 5 BASIC28.3■■■□□ 2.12
KCNQ4P56696 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC28.3■■■□□ 2.12
KCNQ4P56696 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
KCNQ4P56696 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
KCNQ4P56696 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC28.29■■■□□ 2.12
KCNQ4P56696 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC28.29■■■□□ 2.12
KCNQ4P56696 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC28.29■■■□□ 2.12
KCNQ4P56696 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
KCNQ4P56696 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC28.29■■■□□ 2.12
KCNQ4P56696 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC28.29■■■□□ 2.12
KCNQ4P56696 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
KCNQ4P56696 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC28.28■■■□□ 2.12
KCNQ4P56696 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
KCNQ4P56696 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.12
KCNQ4P56696 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
KCNQ4P56696 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC28.28■■■□□ 2.12
KCNQ4P56696 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC28.28■■■□□ 2.12
KCNQ4P56696 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC28.28■■■□□ 2.12
KCNQ4P56696 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
KCNQ4P56696 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC28.27■■■□□ 2.12
KCNQ4P56696 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
KCNQ4P56696 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC28.27■■■□□ 2.12
KCNQ4P56696 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC28.27■■■□□ 2.12
KCNQ4P56696 UBE2DNL-204ENST00000602536 740 ntBASIC28.27■■■□□ 2.12
KCNQ4P56696 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
KCNQ4P56696 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
KCNQ4P56696 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
KCNQ4P56696 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
KCNQ4P56696 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
KCNQ4P56696 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
KCNQ4P56696 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC28.26■■■□□ 2.11
KCNQ4P56696 FAM201B-201ENST00000458407 597 ntBASIC28.26■■■□□ 2.11
KCNQ4P56696 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC28.26■■■□□ 2.11
KCNQ4P56696 OAS3-207ENST00000551007 998 ntTSL 2 BASIC28.26■■■□□ 2.11
KCNQ4P56696 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.11
KCNQ4P56696 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC28.26■■■□□ 2.11
KCNQ4P56696 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
KCNQ4P56696 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
KCNQ4P56696 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC28.26■■■□□ 2.11
KCNQ4P56696 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
KCNQ4P56696 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
KCNQ4P56696 AC007322.1-201ENST00000426983 750 ntBASIC28.25■■■□□ 2.11
KCNQ4P56696 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC28.25■■■□□ 2.11
KCNQ4P56696 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC28.25■■■□□ 2.11
KCNQ4P56696 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC28.25■■■□□ 2.11
KCNQ4P56696 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC28.25■■■□□ 2.11
KCNQ4P56696 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
KCNQ4P56696 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
KCNQ4P56696 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
KCNQ4P56696 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC28.24■■■□□ 2.11
KCNQ4P56696 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC28.24■■■□□ 2.11
KCNQ4P56696 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
KCNQ4P56696 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC28.24■■■□□ 2.11
KCNQ4P56696 AC087239.1-201ENST00000622671 572 ntBASIC28.24■■■□□ 2.11
KCNQ4P56696 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC28.24■■■□□ 2.11
KCNQ4P56696 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
KCNQ4P56696 PARP1-202ENST00000366792 553 ntTSL 3 BASIC28.23■■■□□ 2.11
KCNQ4P56696 AC010141.3-201ENST00000456659 717 ntBASIC28.23■■■□□ 2.11
KCNQ4P56696 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
KCNQ4P56696 AC231657.2-201ENST00000624556 255 ntBASIC28.23■■■□□ 2.11
KCNQ4P56696 PFKL-212ENST00000628044 129 ntTSL 3 BASIC28.23■■■□□ 2.11
KCNQ4P56696 TBCB-214ENST00000629269 413 ntTSL 5 BASIC28.23■■■□□ 2.11
KCNQ4P56696 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
KCNQ4P56696 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
KCNQ4P56696 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
KCNQ4P56696 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
KCNQ4P56696 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
KCNQ4P56696 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
KCNQ4P56696 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
KCNQ4P56696 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC28.22■■■□□ 2.11
KCNQ4P56696 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
KCNQ4P56696 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC28.22■■■□□ 2.11
KCNQ4P56696 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC28.22■■■□□ 2.11
KCNQ4P56696 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC28.22■■■□□ 2.11
KCNQ4P56696 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC28.22■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms