Protein–RNA interactions for Protein: P52917

VPS4, Vacuolar protein sorting-associated protein 4, yeastyeast

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS4P52917 tK(CUU)D2tK(CUU)D2 73 nt4.72□□□□□ -1.65
VPS4P52917 tK(CUU)E1tK(CUU)E1 73 nt4.72□□□□□ -1.65
VPS4P52917 tK(CUU)E2tK(CUU)E2 73 nt4.72□□□□□ -1.65
VPS4P52917 tK(CUU)FtK(CUU)F 73 nt4.72□□□□□ -1.65
VPS4P52917 tK(CUU)G1tK(CUU)G1 73 nt4.72□□□□□ -1.65
VPS4P52917 tK(CUU)G2tK(CUU)G2 73 nt4.72□□□□□ -1.65
VPS4P52917 tK(CUU)G3tK(CUU)G3 73 nt4.72□□□□□ -1.65
VPS4P52917 tK(CUU)ItK(CUU)I 73 nt4.72□□□□□ -1.65
VPS4P52917 tK(CUU)JtK(CUU)J 73 nt4.72□□□□□ -1.65
VPS4P52917 tK(CUU)KtK(CUU)K 73 nt4.72□□□□□ -1.65
VPS4P52917 tK(CUU)MtK(CUU)M 73 nt4.72□□□□□ -1.65
VPS4P52917 tK(CUU)PtK(CUU)P 73 nt4.72□□□□□ -1.65
VPS4P52917 YGL258W-AYGL258W-A 234 nt4.72□□□□□ -1.65
VPS4P52917 OKP1YGR179C 1221 nt4.72□□□□□ -1.65
VPS4P52917 YHR069C-AYHR069C-A 363 nt4.72□□□□□ -1.65
VPS4P52917 RDN5-1RDN5-1 121 nt4.72□□□□□ -1.65
VPS4P52917 HMX1YLR205C 954 nt4.72□□□□□ -1.65
VPS4P52917 RDN5-6RDN5-6 121 nt4.72□□□□□ -1.65
VPS4P52917 AAH1YNL141W 1044 nt4.72□□□□□ -1.65
VPS4P52917 AIM39YOL053W 1188 nt4.72□□□□□ -1.65
VPS4P52917 MED7YOL135C 669 nt4.72□□□□□ -1.65
VPS4P52917 YPL114WYPL114W 420 nt4.72□□□□□ -1.65
VPS4P52917 DAS2YDR020C 699 nt4.71□□□□□ -1.66
VPS4P52917 LAC1YKL008C 1257 nt4.71□□□□□ -1.66
VPS4P52917 CDC42YLR229C 576 nt4.71□□□□□ -1.66
VPS4P52917 NIT3YLR351C 876 nt4.71□□□□□ -1.66
VPS4P52917 FBP1YLR377C 1047 nt4.71□□□□□ -1.66
VPS4P52917 CNS1YBR155W 1158 nt4.71□□□□□ -1.66
VPS4P52917 EFM2YBR271W 1260 nt4.71□□□□□ -1.66
VPS4P52917 RSC3YDR303C 2658 nt4.71□□□□□ -1.66
VPS4P52917 RIA1YNL163C 3333 nt4.71□□□□□ -1.66
VPS4P52917 MDM38YOL027C 1722 nt4.71□□□□□ -1.66
VPS4P52917 KAR5YMR065W 1515 nt4.71□□□□□ -1.66
VPS4P52917 PRP9YDL030W 1593 nt4.7□□□□□ -1.66
VPS4P52917 CWH43YCR017C 2862 nt4.7□□□□□ -1.66
VPS4P52917 SWI1YPL016W 3945 nt4.7□□□□□ -1.66
VPS4P52917 BSC1YDL037C 987 nt4.7□□□□□ -1.66
VPS4P52917 YER067C-AYER067C-A 324 nt4.7□□□□□ -1.66
VPS4P52917 YIL171WYIL171W 330 nt4.7□□□□□ -1.66
VPS4P52917 YLR125WYLR125W 411 nt4.7□□□□□ -1.66
VPS4P52917 YLR156WYLR156W 345 nt4.7□□□□□ -1.66
VPS4P52917 YLR159WYLR159W 345 nt4.7□□□□□ -1.66
VPS4P52917 YLR161WYLR161W 345 nt4.7□□□□□ -1.66
VPS4P52917 SHE3YBR130C 1278 nt4.7□□□□□ -1.66
VPS4P52917 NGL3YML118W 1518 nt4.7□□□□□ -1.66
VPS4P52917 RAD52YML032C 1416 nt4.7□□□□□ -1.66
VPS4P52917 KCC4YCL024W 3114 nt4.7□□□□□ -1.66
VPS4P52917 SRO9YCL037C 1305 nt4.7□□□□□ -1.66
VPS4P52917 YND1YER005W 1893 nt4.69□□□□□ -1.66
VPS4P52917 MSS2YDL107W 1056 nt4.69□□□□□ -1.66
VPS4P52917 snR7-SsnR7-S 179 nt4.69□□□□□ -1.66
VPS4P52917 RPS13YDR064W 456 nt4.69□□□□□ -1.66
VPS4P52917 HIS6YIL020C 786 nt4.69□□□□□ -1.66
VPS4P52917 EBP2YKL172W 1284 nt4.69□□□□□ -1.66
VPS4P52917 JLP1YLL057C 1239 nt4.69□□□□□ -1.66
VPS4P52917 SEC65YML105C 822 nt4.69□□□□□ -1.66
VPS4P52917 TEX1YNL253W 1269 nt4.69□□□□□ -1.66
VPS4P52917 SLX1YBR228W 915 nt4.69□□□□□ -1.66
VPS4P52917 PAH1YMR165C 2589 nt4.69□□□□□ -1.66
VPS4P52917 EAR1YMR171C 1653 nt4.69□□□□□ -1.66
VPS4P52917 FAR10YLR238W 1437 nt4.69□□□□□ -1.66
VPS4P52917 MEF2YJL102W 2460 nt4.69□□□□□ -1.66
VPS4P52917 RRI1YDL216C 1323 nt4.69□□□□□ -1.66
VPS4P52917 VPS45YGL095C 1734 nt4.69□□□□□ -1.66
VPS4P52917 TRK1YJL129C 3708 nt4.69□□□□□ -1.66
VPS4P52917 AGA1YNR044W 2178 nt4.68□□□□□ -1.66
VPS4P52917 MMT1YMR177W 1533 nt4.68□□□□□ -1.66
VPS4P52917 PER1YCR044C 1074 nt4.68□□□□□ -1.66
VPS4P52917 YGL193CYGL193C 312 nt4.68□□□□□ -1.66
VPS4P52917 YGL214WYGL214W 486 nt4.68□□□□□ -1.66
VPS4P52917 VMA22YHR060W 546 nt4.68□□□□□ -1.66
VPS4P52917 YKL162C-AYKL162C-A 153 nt4.68□□□□□ -1.66
VPS4P52917 MRPS8YMR158W 468 nt4.68□□□□□ -1.66
VPS4P52917 ASI2YNL159C 870 nt4.68□□□□□ -1.66
VPS4P52917 GLO4YOR040W 858 nt4.68□□□□□ -1.66
VPS4P52917 ATG26YLR189C 3597 nt4.68□□□□□ -1.66
VPS4P52917 KRE5YOR336W 4098 nt4.68□□□□□ -1.66
VPS4P52917 ECM32YER176W 3366 nt4.67□□□□□ -1.66
VPS4P52917 DBP3YGL078C 1572 nt4.67□□□□□ -1.66
VPS4P52917 MNL1YHR204W 2391 nt4.67□□□□□ -1.66
VPS4P52917 YDR290WYDR290W 330 nt4.67□□□□□ -1.66
VPS4P52917 TRP4YDR354W 1143 nt4.67□□□□□ -1.66
VPS4P52917 tQ(UUG)CtQ(UUG)C 72 nt4.67□□□□□ -1.66
VPS4P52917 tQ(UUG)D1tQ(UUG)D1 72 nt4.67□□□□□ -1.66
VPS4P52917 YHB1YGR234W 1200 nt4.67□□□□□ -1.66
VPS4P52917 tQ(UUG)D2tQ(UUG)D2 72 nt4.67□□□□□ -1.66
VPS4P52917 tQ(UUG)D3tQ(UUG)D3 72 nt4.67□□□□□ -1.66
VPS4P52917 tQ(UUG)E1tQ(UUG)E1 72 nt4.67□□□□□ -1.66
VPS4P52917 tQ(UUG)HtQ(UUG)H 72 nt4.67□□□□□ -1.66
VPS4P52917 tQ(UUG)LtQ(UUG)L 72 nt4.67□□□□□ -1.66
VPS4P52917 VPS21YOR089C 633 nt4.67□□□□□ -1.66
VPS4P52917 PDR12YPL058C 4536 nt4.67□□□□□ -1.66
VPS4P52917 POL12YBL035C 2118 nt4.67□□□□□ -1.66
VPS4P52917 SKM1YOL113W 1968 nt4.67□□□□□ -1.66
VPS4P52917 MET4YNL103W 2019 nt4.67□□□□□ -1.66
VPS4P52917 NTH1YDR001C 2256 nt4.66□□□□□ -1.66
VPS4P52917 GPB1YOR371C 2694 nt4.66□□□□□ -1.66
VPS4P52917 YDR090CYDR090C 933 nt4.66□□□□□ -1.66
VPS4P52917 YER138W-AYER138W-A 105 nt4.66□□□□□ -1.66
VPS4P52917 RTA1YGR213C 954 nt4.66□□□□□ -1.66
Retrieved 100 of 7,029 protein–RNA pairs in 22.8 ms