Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLK3P49761 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.66■□□□□ 0.9
CLK3P49761 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLK3P49761 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLK3P49761 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CLK3P49761 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLK3P49761 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLK3P49761 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CLK3P49761 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.65■□□□□ 0.9
CLK3P49761 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CLK3P49761 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLK3P49761 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLK3P49761 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CLK3P49761 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.65■□□□□ 0.9
CLK3P49761 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLK3P49761 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.65■□□□□ 0.9
CLK3P49761 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLK3P49761 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLK3P49761 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLK3P49761 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CLK3P49761 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.9
CLK3P49761 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.64■□□□□ 0.89
CLK3P49761 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLK3P49761 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLK3P49761 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLK3P49761 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.64■□□□□ 0.89
CLK3P49761 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLK3P49761 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.64■□□□□ 0.89
CLK3P49761 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.64■□□□□ 0.89
CLK3P49761 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLK3P49761 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLK3P49761 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLK3P49761 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLK3P49761 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
CLK3P49761 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLK3P49761 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLK3P49761 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLK3P49761 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.63■□□□□ 0.89
CLK3P49761 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLK3P49761 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLK3P49761 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.63■□□□□ 0.89
CLK3P49761 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.63■□□□□ 0.89
CLK3P49761 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLK3P49761 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.63■□□□□ 0.89
CLK3P49761 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLK3P49761 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLK3P49761 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.63■□□□□ 0.89
CLK3P49761 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CLK3P49761 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.62■□□□□ 0.89
CLK3P49761 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLK3P49761 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.62■□□□□ 0.89
CLK3P49761 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.62■□□□□ 0.89
CLK3P49761 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CLK3P49761 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.62■□□□□ 0.89
CLK3P49761 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLK3P49761 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.62■□□□□ 0.89
CLK3P49761 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.62■□□□□ 0.89
CLK3P49761 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLK3P49761 AC009102.2-201ENST00000606772 1639 ntBASIC20.62■□□□□ 0.89
CLK3P49761 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLK3P49761 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.62■□□□□ 0.89
CLK3P49761 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CLK3P49761 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLK3P49761 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLK3P49761 SLC25A24-204ENST00000569674 2357 ntBASIC20.61■□□□□ 0.89
CLK3P49761 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLK3P49761 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLK3P49761 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLK3P49761 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CLK3P49761 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLK3P49761 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLK3P49761 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CLK3P49761 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.61■□□□□ 0.89
CLK3P49761 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.61■□□□□ 0.89
CLK3P49761 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLK3P49761 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLK3P49761 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.61■□□□□ 0.89
CLK3P49761 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLK3P49761 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
CLK3P49761 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CLK3P49761 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CLK3P49761 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.6■□□□□ 0.89
CLK3P49761 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.6■□□□□ 0.89
CLK3P49761 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.6■□□□□ 0.89
CLK3P49761 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLK3P49761 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLK3P49761 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLK3P49761 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLK3P49761 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.6■□□□□ 0.89
CLK3P49761 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLK3P49761 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLK3P49761 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.6■□□□□ 0.89
CLK3P49761 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLK3P49761 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLK3P49761 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLK3P49761 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLK3P49761 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.59■□□□□ 0.89
CLK3P49761 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.59■□□□□ 0.89
CLK3P49761 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLK3P49761 SRD5A1P1-201ENST00000442297 786 ntBASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms