Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 YMR018WYMR018W 1545 nt2.69□□□□□ -1.98
VPS55P47111 TYW1YPL207W 2433 nt2.69□□□□□ -1.98
VPS55P47111 IML2YJL082W 2196 nt2.69□□□□□ -1.98
VPS55P47111 FCF1YDR339C 570 nt2.69□□□□□ -1.98
VPS55P47111 RPS8BYER102W 603 nt2.69□□□□□ -1.98
VPS55P47111 MRP13YGR084C 1020 nt2.69□□□□□ -1.98
VPS55P47111 MRS3YJL133W 945 nt2.69□□□□□ -1.98
VPS55P47111 RPS8AYBL072C 603 nt2.69□□□□□ -1.98
VPS55P47111 ATG8YBL078C 354 nt2.69□□□□□ -1.98
VPS55P47111 snR17asnR17a 333 nt2.69□□□□□ -1.98
VPS55P47111 RPB7YDR404C 516 nt2.68□□□□□ -1.98
VPS55P47111 RRP17YDR412W 708 nt2.68□□□□□ -1.98
VPS55P47111 SPI1YER150W 447 nt2.68□□□□□ -1.98
VPS55P47111 RPL22AYLR061W 366 nt2.68□□□□□ -1.98
VPS55P47111 SHH3YMR118C 591 nt2.68□□□□□ -1.98
VPS55P47111 YPR108W-AYPR108W-A 213 nt2.68□□□□□ -1.98
VPS55P47111 CDS1YBR029C 1374 nt2.68□□□□□ -1.98
VPS55P47111 PMT6YGR199W 2280 nt2.68□□□□□ -1.98
VPS55P47111 CEX1YOR112W 2286 nt2.68□□□□□ -1.98
VPS55P47111 IME4YGL192W 1803 nt2.68□□□□□ -1.98
VPS55P47111 ALR2YFL050C 2577 nt2.67□□□□□ -1.98
VPS55P47111 YAK1YJL141C 2424 nt2.67□□□□□ -1.98
VPS55P47111 RMD1YDL001W 1293 nt2.67□□□□□ -1.98
VPS55P47111 USE1YGL098W 738 nt2.67□□□□□ -1.98
VPS55P47111 YGR079WYGR079W 1113 nt2.67□□□□□ -1.98
VPS55P47111 BCD1YHR040W 1101 nt2.67□□□□□ -1.98
VPS55P47111 HUT1YPL244C 1020 nt2.67□□□□□ -1.98
VPS55P47111 CKS1YBR135W 453 nt2.67□□□□□ -1.98
VPS55P47111 TRS120YDR407C 3870 nt2.67□□□□□ -1.98
VPS55P47111 GCD1YOR260W 1737 nt2.67□□□□□ -1.98
VPS55P47111 RIF1YBR275C 5751 nt2.66□□□□□ -1.98
VPS55P47111 APN2YBL019W 1563 nt2.66□□□□□ -1.98
VPS55P47111 SMP1YBR182C 1359 nt2.66□□□□□ -1.98
VPS55P47111 GCN1YGL195W 8019 nt2.66□□□□□ -1.98
VPS55P47111 QRI7YDL104C 1224 nt2.66□□□□□ -1.98
VPS55P47111 UPS3YDR185C 540 nt2.66□□□□□ -1.98
VPS55P47111 YER039C-AYER039C-A 219 nt2.66□□□□□ -1.98
VPS55P47111 DAN1YJR150C 897 nt2.66□□□□□ -1.98
VPS55P47111 YAL064W-BYAL064W-B 381 nt2.66□□□□□ -1.98
VPS55P47111 YMR122W-AYMR122W-A 255 nt2.66□□□□□ -1.98
VPS55P47111 MED7YOL135C 669 nt2.66□□□□□ -1.98
VPS55P47111 YOR034C-AYOR034C-A 243 nt2.66□□□□□ -1.98
VPS55P47111 FRM2YCL026C-A 582 nt2.66□□□□□ -1.98
VPS55P47111 GLC3YEL011W 2115 nt2.66□□□□□ -1.98
VPS55P47111 BOI2YER114C 3123 nt2.66□□□□□ -1.98
VPS55P47111 RSF2YJR127C 4143 nt2.66□□□□□ -1.98
VPS55P47111 SMC3YJL074C 3693 nt2.65□□□□□ -1.98
VPS55P47111 YDR090CYDR090C 933 nt2.65□□□□□ -1.99
VPS55P47111 PHM6YDR281C 315 nt2.65□□□□□ -1.99
VPS55P47111 YDR391CYDR391C 699 nt2.65□□□□□ -1.99
VPS55P47111 tK(UUU)DtK(UUU)D 73 nt2.65□□□□□ -1.99
VPS55P47111 tK(UUU)G1tK(UUU)G1 73 nt2.65□□□□□ -1.99
VPS55P47111 tK(UUU)G2tK(UUU)G2 73 nt2.65□□□□□ -1.99
VPS55P47111 tK(UUU)KtK(UUU)K 73 nt2.65□□□□□ -1.99
VPS55P47111 tK(UUU)LtK(UUU)L 73 nt2.65□□□□□ -1.99
VPS55P47111 tK(UUU)OtK(UUU)O 73 nt2.65□□□□□ -1.99
VPS55P47111 tK(UUU)PtK(UUU)P 73 nt2.65□□□□□ -1.99
VPS55P47111 YGL132WYGL132W 336 nt2.65□□□□□ -1.99
VPS55P47111 ECM34YHL043W 513 nt2.65□□□□□ -1.99
VPS55P47111 MRP8YKL142W 660 nt2.65□□□□□ -1.99
VPS55P47111 RAD33YML011C 534 nt2.65□□□□□ -1.99
VPS55P47111 TRI1YMR233W 681 nt2.65□□□□□ -1.99
VPS55P47111 RPA135YPR010C 3612 nt2.65□□□□□ -1.99
VPS55P47111 MTH1YDR277C 1302 nt2.65□□□□□ -1.99
VPS55P47111 DIT1YDR403W 1611 nt2.64□□□□□ -1.99
VPS55P47111 SEO1YAL067C 1782 nt2.64□□□□□ -1.99
VPS55P47111 SQS1YNL224C 2304 nt2.64□□□□□ -1.99
VPS55P47111 YNR063WYNR063W 1824 nt2.64□□□□□ -1.99
VPS55P47111 MAF1YDR005C 1188 nt2.64□□□□□ -1.99
VPS55P47111 AIM22YJL046W 1230 nt2.64□□□□□ -1.99
VPS55P47111 CBT1YKL208W 816 nt2.64□□□□□ -1.99
VPS55P47111 RPS7AYOR096W 573 nt2.64□□□□□ -1.99
VPS55P47111 snR3snR3 194 nt2.64□□□□□ -1.99
VPS55P47111 PFK26YIL107C 2484 nt2.64□□□□□ -1.99
VPS55P47111 FLO10YKR102W 3510 nt2.64□□□□□ -1.99
VPS55P47111 MSR1YHR091C 1932 nt2.64□□□□□ -1.99
VPS55P47111 EMC1YCL045C 2283 nt2.63□□□□□ -1.99
VPS55P47111 GPI1YGR216C 1830 nt2.63□□□□□ -1.99
VPS55P47111 LAP3YNL239W 1365 nt2.63□□□□□ -1.99
VPS55P47111 SPT16YGL207W 3108 nt2.63□□□□□ -1.99
VPS55P47111 KTR7YIL085C 1554 nt2.63□□□□□ -1.99
VPS55P47111 YDR161WYDR161W 1164 nt2.63□□□□□ -1.99
VPS55P47111 TOM20YGR082W 552 nt2.63□□□□□ -1.99
VPS55P47111 YLR122CYLR122C 378 nt2.63□□□□□ -1.99
VPS55P47111 MAC1YMR021C 1254 nt2.63□□□□□ -1.99
VPS55P47111 NUP60YAR002W 1620 nt2.63□□□□□ -1.99
VPS55P47111 SNQ2YDR011W 4506 nt2.63□□□□□ -1.99
VPS55P47111 SHQ1YIL104C 1524 nt2.63□□□□□ -1.99
VPS55P47111 FAP7YDL166C 594 nt2.62□□□□□ -1.99
VPS55P47111 PSF1YDR013W 627 nt2.62□□□□□ -1.99
VPS55P47111 STE14YDR410C 720 nt2.62□□□□□ -1.99
VPS55P47111 PAU10YDR542W 363 nt2.62□□□□□ -1.99
VPS55P47111 ERJ5YFR041C 888 nt2.62□□□□□ -1.99
VPS55P47111 PAU11YGL261C 363 nt2.62□□□□□ -1.99
VPS55P47111 PAU13YHL046C 363 nt2.62□□□□□ -1.99
VPS55P47111 REV7YIL139C 738 nt2.62□□□□□ -1.99
VPS55P47111 GTT1YIR038C 705 nt2.62□□□□□ -1.99
VPS55P47111 DLS1YJL065C 504 nt2.62□□□□□ -1.99
VPS55P47111 YKT6YKL196C 603 nt2.62□□□□□ -1.99
VPS55P47111 PAU4YLR461W 363 nt2.62□□□□□ -1.99
Retrieved 100 of 7,029 protein–RNA pairs in 17.6 ms