Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SNCAP37840 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SNCAP37840 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNCAP37840 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.94■□□□□ 0.46
SNCAP37840 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.94■□□□□ 0.46
SNCAP37840 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNCAP37840 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.93■□□□□ 0.46
SNCAP37840 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNCAP37840 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNCAP37840 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNCAP37840 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SNCAP37840 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNCAP37840 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNCAP37840 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
SNCAP37840 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC17.93■□□□□ 0.46
SNCAP37840 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNCAP37840 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNCAP37840 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.93■□□□□ 0.46
SNCAP37840 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNCAP37840 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNCAP37840 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.93■□□□□ 0.46
SNCAP37840 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNCAP37840 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.93■□□□□ 0.46
SNCAP37840 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.92■□□□□ 0.46
SNCAP37840 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SNCAP37840 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNCAP37840 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SNCAP37840 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SNCAP37840 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNCAP37840 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNCAP37840 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNCAP37840 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SNCAP37840 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNCAP37840 KRT18P24-201ENST00000344739 1156 ntBASIC17.92■□□□□ 0.46
SNCAP37840 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SNCAP37840 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC17.92■□□□□ 0.46
SNCAP37840 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC17.92■□□□□ 0.46
SNCAP37840 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
SNCAP37840 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SNCAP37840 RNF165-205ENST00000588679 2904 ntBASIC17.92■□□□□ 0.46
SNCAP37840 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.91■□□□□ 0.46
SNCAP37840 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SNCAP37840 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.91■□□□□ 0.46
SNCAP37840 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNCAP37840 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SNCAP37840 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNCAP37840 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SNCAP37840 IDNK-201ENST00000376417 511 ntTSL 5 BASIC17.91■□□□□ 0.46
SNCAP37840 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNCAP37840 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNCAP37840 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNCAP37840 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNCAP37840 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SNCAP37840 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.9■□□□□ 0.46
SNCAP37840 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.9■□□□□ 0.46
SNCAP37840 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SNCAP37840 AC139530.1-201ENST00000575312 1977 ntBASIC17.9■□□□□ 0.46
SNCAP37840 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SNCAP37840 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNCAP37840 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.9■□□□□ 0.46
SNCAP37840 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNCAP37840 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.9■□□□□ 0.46
SNCAP37840 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC17.9■□□□□ 0.46
SNCAP37840 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.9■□□□□ 0.46
SNCAP37840 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
SNCAP37840 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.89■□□□□ 0.46
SNCAP37840 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC17.89■□□□□ 0.45
SNCAP37840 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC17.89■□□□□ 0.45
SNCAP37840 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SNCAP37840 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
SNCAP37840 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.89■□□□□ 0.45
SNCAP37840 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.89■□□□□ 0.45
SNCAP37840 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNCAP37840 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNCAP37840 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNCAP37840 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNCAP37840 ATP5G2P3-201ENST00000429083 425 ntBASIC17.89■□□□□ 0.45
SNCAP37840 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.89■□□□□ 0.45
SNCAP37840 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC17.89■□□□□ 0.45
SNCAP37840 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC17.89■□□□□ 0.45
SNCAP37840 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
SNCAP37840 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
SNCAP37840 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNCAP37840 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNCAP37840 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNCAP37840 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNCAP37840 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNCAP37840 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNCAP37840 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.89■□□□□ 0.45
SNCAP37840 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNCAP37840 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNCAP37840 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNCAP37840 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNCAP37840 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNCAP37840 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SNCAP37840 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.88■□□□□ 0.45
SNCAP37840 AC004987.1-201ENST00000428627 508 ntBASIC17.88■□□□□ 0.45
SNCAP37840 MIR4281-201ENST00000580852 62 ntBASIC17.88■□□□□ 0.45
SNCAP37840 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.88■□□□□ 0.45
SNCAP37840 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms