Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC27.33■■□□□ 1.97
PDE6BP35913 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC27.33■■□□□ 1.97
PDE6BP35913 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
PDE6BP35913 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC27.33■■□□□ 1.97
PDE6BP35913 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PDE6BP35913 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PDE6BP35913 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
PDE6BP35913 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
PDE6BP35913 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PDE6BP35913 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
PDE6BP35913 TSPY6P-201ENST00000448518 926 ntBASIC27.32■■□□□ 1.96
PDE6BP35913 TSPY20P-201ENST00000450910 630 ntBASIC27.32■■□□□ 1.96
PDE6BP35913 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC27.32■■□□□ 1.96
PDE6BP35913 AL050303.2-201ENST00000619798 666 ntBASIC27.32■■□□□ 1.96
PDE6BP35913 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PDE6BP35913 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
PDE6BP35913 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PDE6BP35913 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
PDE6BP35913 OXCT2P1-201ENST00000447263 1535 ntBASIC27.31■■□□□ 1.96
PDE6BP35913 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PDE6BP35913 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PDE6BP35913 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PDE6BP35913 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PDE6BP35913 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PDE6BP35913 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PDE6BP35913 AC231657.2-201ENST00000624556 255 ntBASIC27.31■■□□□ 1.96
PDE6BP35913 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC27.31■■□□□ 1.96
PDE6BP35913 AC066615.1-201ENST00000640911 628 ntBASIC27.31■■□□□ 1.96
PDE6BP35913 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PDE6BP35913 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC27.31■■□□□ 1.96
PDE6BP35913 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
PDE6BP35913 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PDE6BP35913 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC27.3■■□□□ 1.96
PDE6BP35913 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC27.3■■□□□ 1.96
PDE6BP35913 MAZ-216ENST00000616501 991 ntTSL 5 BASIC27.3■■□□□ 1.96
PDE6BP35913 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
PDE6BP35913 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
PDE6BP35913 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC27.29■■□□□ 1.96
PDE6BP35913 KRT18P6-201ENST00000555540 1265 ntBASIC27.29■■□□□ 1.96
PDE6BP35913 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
PDE6BP35913 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
PDE6BP35913 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PDE6BP35913 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC27.29■■□□□ 1.96
PDE6BP35913 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PDE6BP35913 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
PDE6BP35913 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
PDE6BP35913 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC27.28■■□□□ 1.96
PDE6BP35913 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
PDE6BP35913 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
PDE6BP35913 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
PDE6BP35913 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PDE6BP35913 ASL-203ENST00000380839 1765 ntTSL 5 BASIC27.27■■□□□ 1.96
PDE6BP35913 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC27.27■■□□□ 1.96
PDE6BP35913 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PDE6BP35913 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC27.27■■□□□ 1.96
PDE6BP35913 AC104187.1-201ENST00000607510 612 ntBASIC27.27■■□□□ 1.96
PDE6BP35913 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC27.27■■□□□ 1.96
PDE6BP35913 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PDE6BP35913 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PDE6BP35913 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC27.27■■□□□ 1.96
PDE6BP35913 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
PDE6BP35913 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
PDE6BP35913 AC079630.1-202ENST00000618127 1840 ntBASIC27.26■■□□□ 1.95
PDE6BP35913 AC007322.1-201ENST00000426983 750 ntBASIC27.26■■□□□ 1.95
PDE6BP35913 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC27.26■■□□□ 1.95
PDE6BP35913 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC27.26■■□□□ 1.95
PDE6BP35913 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PDE6BP35913 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC27.26■■□□□ 1.95
PDE6BP35913 SLC7A5P2-201ENST00000553010 536 ntBASIC27.26■■□□□ 1.95
PDE6BP35913 DUX4L16-201ENST00000555130 1264 ntBASIC27.26■■□□□ 1.95
PDE6BP35913 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC27.26■■□□□ 1.95
PDE6BP35913 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
PDE6BP35913 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC27.26■■□□□ 1.95
PDE6BP35913 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.95
PDE6BP35913 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
PDE6BP35913 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC27.26■■□□□ 1.95
PDE6BP35913 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
PDE6BP35913 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PDE6BP35913 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC27.25■■□□□ 1.95
PDE6BP35913 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
PDE6BP35913 GUSBP6-202ENST00000438529 1198 ntBASIC27.25■■□□□ 1.95
PDE6BP35913 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC27.25■■□□□ 1.95
PDE6BP35913 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC27.25■■□□□ 1.95
PDE6BP35913 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
PDE6BP35913 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC27.25■■□□□ 1.95
PDE6BP35913 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PDE6BP35913 KRT87P-202ENST00000534226 1464 ntBASIC27.25■■□□□ 1.95
PDE6BP35913 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC27.25■■□□□ 1.95
PDE6BP35913 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PDE6BP35913 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PDE6BP35913 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC27.24■■□□□ 1.95
PDE6BP35913 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PDE6BP35913 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC27.24■■□□□ 1.95
PDE6BP35913 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC27.24■■□□□ 1.95
PDE6BP35913 OAS3-207ENST00000551007 998 ntTSL 2 BASIC27.24■■□□□ 1.95
PDE6BP35913 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC27.24■■□□□ 1.95
PDE6BP35913 AC005181.1-201ENST00000604782 1256 ntBASIC27.24■■□□□ 1.95
PDE6BP35913 TFG-210ENST00000620299 1289 ntTSL 5 BASIC27.24■■□□□ 1.95
PDE6BP35913 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC27.24■■□□□ 1.95
PDE6BP35913 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms