Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SDHAP31040 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SDHAP31040 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SDHAP31040 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SDHAP31040 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.62■□□□□ 0.73
SDHAP31040 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.62■□□□□ 0.73
SDHAP31040 AL035685.1-201ENST00000636663 812 ntBASIC19.62■□□□□ 0.73
SDHAP31040 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SDHAP31040 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SDHAP31040 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SDHAP31040 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SDHAP31040 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SDHAP31040 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.62■□□□□ 0.73
SDHAP31040 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.62■□□□□ 0.73
SDHAP31040 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SDHAP31040 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.62■□□□□ 0.73
SDHAP31040 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.62■□□□□ 0.73
SDHAP31040 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SDHAP31040 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.61■□□□□ 0.73
SDHAP31040 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
SDHAP31040 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.61■□□□□ 0.73
SDHAP31040 AC241377.3-202ENST00000626088 1088 ntBASIC19.61■□□□□ 0.73
SDHAP31040 AC241585.3-202ENST00000628937 1088 ntBASIC19.61■□□□□ 0.73
SDHAP31040 AC245100.8-202ENST00000629247 1058 ntBASIC19.61■□□□□ 0.73
SDHAP31040 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.61■□□□□ 0.73
SDHAP31040 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.61■□□□□ 0.73
SDHAP31040 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SDHAP31040 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SDHAP31040 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SDHAP31040 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SDHAP31040 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SDHAP31040 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SDHAP31040 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SDHAP31040 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
SDHAP31040 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SDHAP31040 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.6■□□□□ 0.73
SDHAP31040 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SDHAP31040 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
SDHAP31040 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SDHAP31040 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.6■□□□□ 0.73
SDHAP31040 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.6■□□□□ 0.73
SDHAP31040 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SDHAP31040 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
SDHAP31040 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SDHAP31040 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.6■□□□□ 0.73
SDHAP31040 CA15P2-201ENST00000611168 834 ntBASIC19.6■□□□□ 0.73
SDHAP31040 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SDHAP31040 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SDHAP31040 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SDHAP31040 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SDHAP31040 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SDHAP31040 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SDHAP31040 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.59■□□□□ 0.73
SDHAP31040 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SDHAP31040 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SDHAP31040 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SDHAP31040 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.59■□□□□ 0.73
SDHAP31040 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SDHAP31040 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.59■□□□□ 0.73
SDHAP31040 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SDHAP31040 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SDHAP31040 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.59■□□□□ 0.73
SDHAP31040 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SDHAP31040 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SDHAP31040 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.59■□□□□ 0.73
SDHAP31040 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.59■□□□□ 0.73
SDHAP31040 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SDHAP31040 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.59■□□□□ 0.73
SDHAP31040 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.59■□□□□ 0.73
SDHAP31040 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SDHAP31040 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SDHAP31040 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SDHAP31040 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.59■□□□□ 0.73
SDHAP31040 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SDHAP31040 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SDHAP31040 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SDHAP31040 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
SDHAP31040 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
SDHAP31040 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.58■□□□□ 0.72
SDHAP31040 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.58■□□□□ 0.72
SDHAP31040 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.58■□□□□ 0.72
SDHAP31040 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.58■□□□□ 0.72
SDHAP31040 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SDHAP31040 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SDHAP31040 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SDHAP31040 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SDHAP31040 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.57■□□□□ 0.72
SDHAP31040 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SDHAP31040 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
SDHAP31040 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SDHAP31040 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SDHAP31040 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.57■□□□□ 0.72
SDHAP31040 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SDHAP31040 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.57■□□□□ 0.72
SDHAP31040 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SDHAP31040 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SDHAP31040 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SDHAP31040 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SDHAP31040 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SDHAP31040 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms