Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RARAP10276 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.01■■□□□ 1.27
RARAP10276 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.01■■□□□ 1.27
RARAP10276 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.01■■□□□ 1.27
RARAP10276 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.01■■□□□ 1.27
RARAP10276 AC007375.3-201ENST00000600936 2314 ntBASIC23■■□□□ 1.27
RARAP10276 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23■■□□□ 1.27
RARAP10276 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23■■□□□ 1.27
RARAP10276 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
RARAP10276 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23■■□□□ 1.27
RARAP10276 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23■■□□□ 1.27
RARAP10276 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23■■□□□ 1.27
RARAP10276 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23■■□□□ 1.27
RARAP10276 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23■■□□□ 1.27
RARAP10276 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RARAP10276 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23■■□□□ 1.27
RARAP10276 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
RARAP10276 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RARAP10276 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23■■□□□ 1.27
RARAP10276 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23■■□□□ 1.27
RARAP10276 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23■■□□□ 1.27
RARAP10276 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.99■■□□□ 1.27
RARAP10276 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RARAP10276 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RARAP10276 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RARAP10276 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.99■■□□□ 1.27
RARAP10276 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RARAP10276 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
RARAP10276 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RARAP10276 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.99■■□□□ 1.27
RARAP10276 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RARAP10276 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RARAP10276 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RARAP10276 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RARAP10276 C11orf96-202ENST00000528572 1834 ntBASIC22.98■■□□□ 1.27
RARAP10276 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RARAP10276 AC004687.1-201ENST00000579003 1625 ntBASIC22.98■■□□□ 1.27
RARAP10276 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
RARAP10276 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
RARAP10276 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RARAP10276 AL512631.2-201ENST00000604634 923 ntBASIC22.98■■□□□ 1.27
RARAP10276 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
RARAP10276 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RARAP10276 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
RARAP10276 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
RARAP10276 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
RARAP10276 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
RARAP10276 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22.98■■□□□ 1.27
RARAP10276 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.98■■□□□ 1.27
RARAP10276 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
RARAP10276 AL499627.2-201ENST00000606283 725 ntBASIC22.97■■□□□ 1.27
RARAP10276 AC241377.3-202ENST00000626088 1088 ntBASIC22.97■■□□□ 1.27
RARAP10276 AC241585.3-202ENST00000628937 1088 ntBASIC22.97■■□□□ 1.27
RARAP10276 AC245100.8-202ENST00000629247 1058 ntBASIC22.97■■□□□ 1.27
RARAP10276 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.97■■□□□ 1.27
RARAP10276 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RARAP10276 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC22.97■■□□□ 1.27
RARAP10276 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RARAP10276 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.97■■□□□ 1.27
RARAP10276 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RARAP10276 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
RARAP10276 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.96■■□□□ 1.27
RARAP10276 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
RARAP10276 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RARAP10276 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.96■■□□□ 1.27
RARAP10276 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.96■■□□□ 1.27
RARAP10276 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.96■■□□□ 1.27
RARAP10276 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.96■■□□□ 1.27
RARAP10276 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
RARAP10276 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RARAP10276 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.96■■□□□ 1.27
RARAP10276 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RARAP10276 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.96■■□□□ 1.27
RARAP10276 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
RARAP10276 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
RARAP10276 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RARAP10276 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RARAP10276 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
RARAP10276 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RARAP10276 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
RARAP10276 AC006455.2-201ENST00000429931 906 ntBASIC22.95■■□□□ 1.26
RARAP10276 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.95■■□□□ 1.26
RARAP10276 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.95■■□□□ 1.26
RARAP10276 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RARAP10276 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC22.95■■□□□ 1.26
RARAP10276 AC099791.2-201ENST00000605725 427 ntBASIC22.95■■□□□ 1.26
RARAP10276 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RARAP10276 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC22.95■■□□□ 1.26
RARAP10276 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RARAP10276 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RARAP10276 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RARAP10276 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.94■■□□□ 1.26
RARAP10276 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RARAP10276 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RARAP10276 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RARAP10276 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC22.94■■□□□ 1.26
RARAP10276 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RARAP10276 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RARAP10276 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.94■■□□□ 1.26
RARAP10276 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms