Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC29.33■■■□□ 2.29
CSB-PGBD3P0DP91 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC29.33■■■□□ 2.29
CSB-PGBD3P0DP91 MED17-227ENST00000640521 2047 ntTSL 5 BASIC29.33■■■□□ 2.29
CSB-PGBD3P0DP91 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC29.32■■■□□ 2.28
CSB-PGBD3P0DP91 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC29.32■■■□□ 2.28
CSB-PGBD3P0DP91 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC29.32■■■□□ 2.28
CSB-PGBD3P0DP91 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CSB-PGBD3P0DP91 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
CSB-PGBD3P0DP91 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
CSB-PGBD3P0DP91 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC29.32■■■□□ 2.28
CSB-PGBD3P0DP91 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC29.32■■■□□ 2.28
CSB-PGBD3P0DP91 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC29.32■■■□□ 2.28
CSB-PGBD3P0DP91 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC29.31■■■□□ 2.28
CSB-PGBD3P0DP91 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC29.31■■■□□ 2.28
CSB-PGBD3P0DP91 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC29.31■■■□□ 2.28
CSB-PGBD3P0DP91 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC29.31■■■□□ 2.28
CSB-PGBD3P0DP91 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC29.31■■■□□ 2.28
CSB-PGBD3P0DP91 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CSB-PGBD3P0DP91 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CSB-PGBD3P0DP91 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC29.3■■■□□ 2.28
CSB-PGBD3P0DP91 GPX1P1-201ENST00000388829 606 ntBASIC29.3■■■□□ 2.28
CSB-PGBD3P0DP91 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC29.3■■■□□ 2.28
CSB-PGBD3P0DP91 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC29.3■■■□□ 2.28
CSB-PGBD3P0DP91 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CSB-PGBD3P0DP91 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CSB-PGBD3P0DP91 MDK-213ENST00000617138 635 ntTSL 2 BASIC29.29■■■□□ 2.28
CSB-PGBD3P0DP91 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
CSB-PGBD3P0DP91 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC29.29■■■□□ 2.28
CSB-PGBD3P0DP91 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CSB-PGBD3P0DP91 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC29.28■■■□□ 2.28
CSB-PGBD3P0DP91 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
CSB-PGBD3P0DP91 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
CSB-PGBD3P0DP91 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC29.28■■■□□ 2.28
CSB-PGBD3P0DP91 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
CSB-PGBD3P0DP91 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CSB-PGBD3P0DP91 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC29.28■■■□□ 2.28
CSB-PGBD3P0DP91 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CSB-PGBD3P0DP91 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CSB-PGBD3P0DP91 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
CSB-PGBD3P0DP91 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CSB-PGBD3P0DP91 CPT2-209ENST00000636935 803 ntTSL 5 BASIC29.27■■■□□ 2.28
CSB-PGBD3P0DP91 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
CSB-PGBD3P0DP91 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC29.27■■■□□ 2.28
CSB-PGBD3P0DP91 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC29.26■■■□□ 2.27
CSB-PGBD3P0DP91 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC29.26■■■□□ 2.27
CSB-PGBD3P0DP91 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC29.26■■■□□ 2.27
CSB-PGBD3P0DP91 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
CSB-PGBD3P0DP91 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC29.26■■■□□ 2.27
CSB-PGBD3P0DP91 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
CSB-PGBD3P0DP91 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
CSB-PGBD3P0DP91 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
CSB-PGBD3P0DP91 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC29.25■■■□□ 2.27
CSB-PGBD3P0DP91 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC29.25■■■□□ 2.27
CSB-PGBD3P0DP91 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC29.25■■■□□ 2.27
CSB-PGBD3P0DP91 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
CSB-PGBD3P0DP91 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC29.25■■■□□ 2.27
CSB-PGBD3P0DP91 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
CSB-PGBD3P0DP91 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC29.24■■■□□ 2.27
CSB-PGBD3P0DP91 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC29.24■■■□□ 2.27
CSB-PGBD3P0DP91 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC29.24■■■□□ 2.27
CSB-PGBD3P0DP91 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC29.23■■■□□ 2.27
CSB-PGBD3P0DP91 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC29.23■■■□□ 2.27
CSB-PGBD3P0DP91 EED-207ENST00000528180 1745 ntTSL 5 BASIC29.23■■■□□ 2.27
CSB-PGBD3P0DP91 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CSB-PGBD3P0DP91 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CSB-PGBD3P0DP91 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC29.23■■■□□ 2.27
CSB-PGBD3P0DP91 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC29.23■■■□□ 2.27
CSB-PGBD3P0DP91 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC29.23■■■□□ 2.27
CSB-PGBD3P0DP91 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC29.23■■■□□ 2.27
CSB-PGBD3P0DP91 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CSB-PGBD3P0DP91 TMEM191A-211ENST00000637163 1067 ntBASIC29.23■■■□□ 2.27
CSB-PGBD3P0DP91 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC29.23■■■□□ 2.27
CSB-PGBD3P0DP91 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CSB-PGBD3P0DP91 AL353803.4-201ENST00000565882 1934 ntBASIC29.23■■■□□ 2.27
CSB-PGBD3P0DP91 OXCT2P1-201ENST00000447263 1535 ntBASIC29.23■■■□□ 2.27
CSB-PGBD3P0DP91 ASL-203ENST00000380839 1765 ntTSL 5 BASIC29.23■■■□□ 2.27
CSB-PGBD3P0DP91 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC29.23■■■□□ 2.27
CSB-PGBD3P0DP91 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CSB-PGBD3P0DP91 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
CSB-PGBD3P0DP91 APTR-205ENST00000447009 902 ntTSL 2 BASIC29.22■■■□□ 2.27
CSB-PGBD3P0DP91 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC29.22■■■□□ 2.27
CSB-PGBD3P0DP91 MFSD11-216ENST00000590393 1141 ntBASIC29.22■■■□□ 2.27
CSB-PGBD3P0DP91 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC29.22■■■□□ 2.27
CSB-PGBD3P0DP91 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CSB-PGBD3P0DP91 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
CSB-PGBD3P0DP91 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
CSB-PGBD3P0DP91 CD99P1-205ENST00000527459 561 ntBASIC29.21■■■□□ 2.27
CSB-PGBD3P0DP91 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC29.21■■■□□ 2.27
CSB-PGBD3P0DP91 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC29.21■■■□□ 2.27
CSB-PGBD3P0DP91 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
CSB-PGBD3P0DP91 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC29.21■■■□□ 2.27
CSB-PGBD3P0DP91 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
CSB-PGBD3P0DP91 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
CSB-PGBD3P0DP91 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
CSB-PGBD3P0DP91 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC29.2■■■□□ 2.27
CSB-PGBD3P0DP91 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC29.2■■■□□ 2.26
CSB-PGBD3P0DP91 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC29.2■■■□□ 2.26
CSB-PGBD3P0DP91 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC29.2■■■□□ 2.26
CSB-PGBD3P0DP91 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC29.2■■■□□ 2.26
CSB-PGBD3P0DP91 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms