Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HNRNPCL4P0DMR1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HNRNPCL4P0DMR1 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HNRNPCL4P0DMR1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HNRNPCL4P0DMR1 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.33■□□□□ 0.85
HNRNPCL4P0DMR1 KRT16P3-201ENST00000439127 1283 ntBASIC20.33■□□□□ 0.85
HNRNPCL4P0DMR1 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
HNRNPCL4P0DMR1 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.33■□□□□ 0.85
HNRNPCL4P0DMR1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.33■□□□□ 0.85
HNRNPCL4P0DMR1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.33■□□□□ 0.85
HNRNPCL4P0DMR1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.33■□□□□ 0.84
HNRNPCL4P0DMR1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.32■□□□□ 0.84
HNRNPCL4P0DMR1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HNRNPCL4P0DMR1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HNRNPCL4P0DMR1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.32■□□□□ 0.84
HNRNPCL4P0DMR1 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HNRNPCL4P0DMR1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.32■□□□□ 0.84
HNRNPCL4P0DMR1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HNRNPCL4P0DMR1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.32■□□□□ 0.84
HNRNPCL4P0DMR1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HNRNPCL4P0DMR1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HNRNPCL4P0DMR1 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
HNRNPCL4P0DMR1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HNRNPCL4P0DMR1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HNRNPCL4P0DMR1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.32■□□□□ 0.84
HNRNPCL4P0DMR1 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
HNRNPCL4P0DMR1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.32■□□□□ 0.84
HNRNPCL4P0DMR1 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HNRNPCL4P0DMR1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.32■□□□□ 0.84
HNRNPCL4P0DMR1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HNRNPCL4P0DMR1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HNRNPCL4P0DMR1 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HNRNPCL4P0DMR1 CLDN5-201ENST00000403084 2357 ntBASIC20.31■□□□□ 0.84
HNRNPCL4P0DMR1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HNRNPCL4P0DMR1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
HNRNPCL4P0DMR1 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.31■□□□□ 0.84
HNRNPCL4P0DMR1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HNRNPCL4P0DMR1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.31■□□□□ 0.84
HNRNPCL4P0DMR1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.31■□□□□ 0.84
HNRNPCL4P0DMR1 CA15P2-201ENST00000611168 834 ntBASIC20.31■□□□□ 0.84
HNRNPCL4P0DMR1 AL035685.1-201ENST00000636663 812 ntBASIC20.31■□□□□ 0.84
HNRNPCL4P0DMR1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.31■□□□□ 0.84
HNRNPCL4P0DMR1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.31■□□□□ 0.84
HNRNPCL4P0DMR1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HNRNPCL4P0DMR1 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HNRNPCL4P0DMR1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HNRNPCL4P0DMR1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HNRNPCL4P0DMR1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HNRNPCL4P0DMR1 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HNRNPCL4P0DMR1 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HNRNPCL4P0DMR1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
HNRNPCL4P0DMR1 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HNRNPCL4P0DMR1 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.3■□□□□ 0.84
HNRNPCL4P0DMR1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.3■□□□□ 0.84
HNRNPCL4P0DMR1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
HNRNPCL4P0DMR1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
HNRNPCL4P0DMR1 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HNRNPCL4P0DMR1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.3■□□□□ 0.84
HNRNPCL4P0DMR1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HNRNPCL4P0DMR1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HNRNPCL4P0DMR1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HNRNPCL4P0DMR1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
HNRNPCL4P0DMR1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.3■□□□□ 0.84
HNRNPCL4P0DMR1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HNRNPCL4P0DMR1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.29■□□□□ 0.84
HNRNPCL4P0DMR1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HNRNPCL4P0DMR1 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HNRNPCL4P0DMR1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HNRNPCL4P0DMR1 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
HNRNPCL4P0DMR1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HNRNPCL4P0DMR1 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HNRNPCL4P0DMR1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HNRNPCL4P0DMR1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.29■□□□□ 0.84
HNRNPCL4P0DMR1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.29■□□□□ 0.84
HNRNPCL4P0DMR1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HNRNPCL4P0DMR1 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HNRNPCL4P0DMR1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.29■□□□□ 0.84
HNRNPCL4P0DMR1 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
HNRNPCL4P0DMR1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
HNRNPCL4P0DMR1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
HNRNPCL4P0DMR1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
HNRNPCL4P0DMR1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.29■□□□□ 0.84
HNRNPCL4P0DMR1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HNRNPCL4P0DMR1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.29■□□□□ 0.84
HNRNPCL4P0DMR1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.28■□□□□ 0.84
HNRNPCL4P0DMR1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HNRNPCL4P0DMR1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.28■□□□□ 0.84
HNRNPCL4P0DMR1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HNRNPCL4P0DMR1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
HNRNPCL4P0DMR1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.28■□□□□ 0.84
HNRNPCL4P0DMR1 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
HNRNPCL4P0DMR1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.28■□□□□ 0.84
HNRNPCL4P0DMR1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HNRNPCL4P0DMR1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.28■□□□□ 0.84
HNRNPCL4P0DMR1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HNRNPCL4P0DMR1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HNRNPCL4P0DMR1 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HNRNPCL4P0DMR1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HNRNPCL4P0DMR1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HNRNPCL4P0DMR1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms