Protein–RNA interactions for Protein: P0C2J4

TY2A-LR1, Transposon Ty2-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-LR1P0C2J4 RIP1YEL024W 648 nt4.3□□□□□ -1.72
TY2A-LR1P0C2J4 YEL045CYEL045C 426 nt4.3□□□□□ -1.72
TY2A-LR1P0C2J4 YEL077W-AYEL077W-A 483 nt4.3□□□□□ -1.72
TY2A-LR1P0C2J4 YER190C-BYER190C-B 483 nt4.3□□□□□ -1.72
TY2A-LR1P0C2J4 YFL068WYFL068W 483 nt4.3□□□□□ -1.72
TY2A-LR1P0C2J4 ERG25YGR060W 930 nt4.3□□□□□ -1.72
TY2A-LR1P0C2J4 YGR296C-BYGR296C-B 483 nt4.3□□□□□ -1.72
TY2A-LR1P0C2J4 MRP4YHL004W 1185 nt4.3□□□□□ -1.72
TY2A-LR1P0C2J4 YHL050W-AYHL050W-A 483 nt4.3□□□□□ -1.72
TY2A-LR1P0C2J4 YHR219C-AYHR219C-A 483 nt4.3□□□□□ -1.72
TY2A-LR1P0C2J4 YIL177W-AYIL177W-A 483 nt4.3□□□□□ -1.72
TY2A-LR1P0C2J4 YJL225W-AYJL225W-A 483 nt4.3□□□□□ -1.72
TY2A-LR1P0C2J4 FIP1YJR093C 984 nt4.3□□□□□ -1.72
TY2A-LR1P0C2J4 YLL066W-AYLL066W-A 483 nt4.3□□□□□ -1.72
TY2A-LR1P0C2J4 YLL067W-AYLL067W-A 483 nt4.3□□□□□ -1.72
TY2A-LR1P0C2J4 YLR466C-AYLR466C-A 483 nt4.3□□□□□ -1.72
TY2A-LR1P0C2J4 YLR467C-AYLR467C-A 483 nt4.3□□□□□ -1.72
TY2A-LR1P0C2J4 YML133W-BYML133W-B 483 nt4.3□□□□□ -1.72
TY2A-LR1P0C2J4 CCS1YMR038C 750 nt4.3□□□□□ -1.72
TY2A-LR1P0C2J4 YMR085WYMR085W 1299 nt4.3□□□□□ -1.72
TY2A-LR1P0C2J4 YBL062WYBL062W 381 nt4.3□□□□□ -1.72
TY2A-LR1P0C2J4 YNL339W-BYNL339W-B 483 nt4.3□□□□□ -1.72
TY2A-LR1P0C2J4 YBL113W-AYBL113W-A 483 nt4.3□□□□□ -1.72
TY2A-LR1P0C2J4 YOR062CYOR062C 807 nt4.3□□□□□ -1.72
TY2A-LR1P0C2J4 YOR396C-AYOR396C-A 483 nt4.3□□□□□ -1.72
TY2A-LR1P0C2J4 YPL283W-BYPL283W-B 483 nt4.3□□□□□ -1.72
TY2A-LR1P0C2J4 YPR204C-AYPR204C-A 483 nt4.3□□□□□ -1.72
TY2A-LR1P0C2J4 YBR292CYBR292C 372 nt4.3□□□□□ -1.72
TY2A-LR1P0C2J4 RRP7YCL031C 894 nt4.3□□□□□ -1.72
TY2A-LR1P0C2J4 MIC60YKR016W 1623 nt4.3□□□□□ -1.72
TY2A-LR1P0C2J4 NOP58YOR310C 1536 nt4.3□□□□□ -1.72
TY2A-LR1P0C2J4 AGA1YNR044W 2178 nt4.3□□□□□ -1.72
TY2A-LR1P0C2J4 GAD1YMR250W 1758 nt4.3□□□□□ -1.72
TY2A-LR1P0C2J4 NUF2YOL069W 1356 nt4.29□□□□□ -1.72
TY2A-LR1P0C2J4 TPS3YMR261C 3165 nt4.29□□□□□ -1.72
TY2A-LR1P0C2J4 SLS1YLR139C 1932 nt4.29□□□□□ -1.72
TY2A-LR1P0C2J4 PEX14YGL153W 1026 nt4.29□□□□□ -1.72
TY2A-LR1P0C2J4 tS(AGA)D3tS(AGA)D3 83 nt4.29□□□□□ -1.72
TY2A-LR1P0C2J4 GVP36YIL041W 981 nt4.29□□□□□ -1.72
TY2A-LR1P0C2J4 YKL162CYKL162C 1209 nt4.29□□□□□ -1.72
TY2A-LR1P0C2J4 YLR444CYLR444C 303 nt4.29□□□□□ -1.72
TY2A-LR1P0C2J4 UFE1YOR075W 1041 nt4.29□□□□□ -1.72
TY2A-LR1P0C2J4 YOR097CYOR097C 528 nt4.29□□□□□ -1.72
TY2A-LR1P0C2J4 YJR061WYJR061W 2808 nt4.29□□□□□ -1.72
TY2A-LR1P0C2J4 YGR125WYGR125W 3111 nt4.28□□□□□ -1.72
TY2A-LR1P0C2J4 RTS1YOR014W 2274 nt4.28□□□□□ -1.72
TY2A-LR1P0C2J4 VAC17YCL063W 1272 nt4.28□□□□□ -1.72
TY2A-LR1P0C2J4 CAB2YIL083C 1098 nt4.28□□□□□ -1.72
TY2A-LR1P0C2J4 YAL066WYAL066W 309 nt4.28□□□□□ -1.72
TY2A-LR1P0C2J4 GAT3YLR013W 426 nt4.28□□□□□ -1.72
TY2A-LR1P0C2J4 BOS1YLR078C 735 nt4.28□□□□□ -1.72
TY2A-LR1P0C2J4 GPN3YLR243W 819 nt4.28□□□□□ -1.72
TY2A-LR1P0C2J4 YML047W-AYML047W-A 366 nt4.28□□□□□ -1.72
TY2A-LR1P0C2J4 RPC34YNR003C 954 nt4.28□□□□□ -1.72
TY2A-LR1P0C2J4 BUD6YLR319C 2367 nt4.28□□□□□ -1.72
TY2A-LR1P0C2J4 YER158CYER158C 1722 nt4.27□□□□□ -1.73
TY2A-LR1P0C2J4 TOS3YGL179C 1683 nt4.27□□□□□ -1.73
TY2A-LR1P0C2J4 RMR1YGL250W 726 nt4.27□□□□□ -1.73
TY2A-LR1P0C2J4 YJL047C-AYJL047C-A 135 nt4.27□□□□□ -1.73
TY2A-LR1P0C2J4 LSO1YJR005C-A 282 nt4.27□□□□□ -1.73
TY2A-LR1P0C2J4 SUI2YJR007W 915 nt4.27□□□□□ -1.73
TY2A-LR1P0C2J4 YAL047W-AYAL047W-A 330 nt4.27□□□□□ -1.73
TY2A-LR1P0C2J4 RGS2YOR107W 930 nt4.27□□□□□ -1.73
TY2A-LR1P0C2J4 IRC13YOR235W 315 nt4.27□□□□□ -1.73
TY2A-LR1P0C2J4 HAT1YPL001W 1125 nt4.27□□□□□ -1.73
TY2A-LR1P0C2J4 SIP1YDR422C 2448 nt4.27□□□□□ -1.73
TY2A-LR1P0C2J4 ABF1YKL112W 2196 nt4.27□□□□□ -1.73
TY2A-LR1P0C2J4 NMD3YHR170W 1557 nt4.27□□□□□ -1.73
TY2A-LR1P0C2J4 ECM18YDR125C 1362 nt4.27□□□□□ -1.73
TY2A-LR1P0C2J4 YTM1YOR272W 1383 nt4.27□□□□□ -1.73
TY2A-LR1P0C2J4 GLO3YER122C 1482 nt4.26□□□□□ -1.73
TY2A-LR1P0C2J4 YCR100CYCR100C 951 nt4.26□□□□□ -1.73
TY2A-LR1P0C2J4 RAD55YDR076W 1221 nt4.26□□□□□ -1.73
TY2A-LR1P0C2J4 tK(CUU)CtK(CUU)C 73 nt4.26□□□□□ -1.73
TY2A-LR1P0C2J4 tK(CUU)D1tK(CUU)D1 73 nt4.26□□□□□ -1.73
TY2A-LR1P0C2J4 tK(CUU)D2tK(CUU)D2 73 nt4.26□□□□□ -1.73
TY2A-LR1P0C2J4 tK(CUU)E1tK(CUU)E1 73 nt4.26□□□□□ -1.73
TY2A-LR1P0C2J4 tK(CUU)E2tK(CUU)E2 73 nt4.26□□□□□ -1.73
TY2A-LR1P0C2J4 tK(CUU)FtK(CUU)F 73 nt4.26□□□□□ -1.73
TY2A-LR1P0C2J4 tK(CUU)G1tK(CUU)G1 73 nt4.26□□□□□ -1.73
TY2A-LR1P0C2J4 tK(CUU)G2tK(CUU)G2 73 nt4.26□□□□□ -1.73
TY2A-LR1P0C2J4 SPR6YER115C 576 nt4.26□□□□□ -1.73
TY2A-LR1P0C2J4 tK(CUU)G3tK(CUU)G3 73 nt4.26□□□□□ -1.73
TY2A-LR1P0C2J4 tK(CUU)ItK(CUU)I 73 nt4.26□□□□□ -1.73
TY2A-LR1P0C2J4 tK(CUU)JtK(CUU)J 73 nt4.26□□□□□ -1.73
TY2A-LR1P0C2J4 tK(CUU)KtK(CUU)K 73 nt4.26□□□□□ -1.73
TY2A-LR1P0C2J4 tK(CUU)MtK(CUU)M 73 nt4.26□□□□□ -1.73
TY2A-LR1P0C2J4 tK(CUU)PtK(CUU)P 73 nt4.26□□□□□ -1.73
TY2A-LR1P0C2J4 GTF1YGR102C 552 nt4.26□□□□□ -1.73
TY2A-LR1P0C2J4 YGR283CYGR283C 1026 nt4.26□□□□□ -1.73
TY2A-LR1P0C2J4 RPP0YLR340W 939 nt4.26□□□□□ -1.73
TY2A-LR1P0C2J4 IBD2YNL164C 1056 nt4.26□□□□□ -1.73
TY2A-LR1P0C2J4 SYC1YOR179C 567 nt4.26□□□□□ -1.73
TY2A-LR1P0C2J4 ECM23YPL021W 564 nt4.26□□□□□ -1.73
TY2A-LR1P0C2J4 SLX1YBR228W 915 nt4.26□□□□□ -1.73
TY2A-LR1P0C2J4 PGM2YMR105C 1710 nt4.26□□□□□ -1.73
TY2A-LR1P0C2J4 HSE1YHL002W 1359 nt4.26□□□□□ -1.73
TY2A-LR1P0C2J4 PFK1YGR240C 2964 nt4.26□□□□□ -1.73
TY2A-LR1P0C2J4 RPC11YDR045C 333 nt4.25□□□□□ -1.73
TY2A-LR1P0C2J4 YER145C-AYER145C-A 438 nt4.25□□□□□ -1.73
Retrieved 100 of 7,029 protein–RNA pairs in 18 ms