Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.93■■□□□ 1.42
CLTAP09496 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.93■■□□□ 1.42
CLTAP09496 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.93■■□□□ 1.42
CLTAP09496 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.93■■□□□ 1.42
CLTAP09496 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.93■■□□□ 1.42
CLTAP09496 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
CLTAP09496 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CLTAP09496 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.93■■□□□ 1.42
CLTAP09496 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CLTAP09496 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.92■■□□□ 1.42
CLTAP09496 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.92■■□□□ 1.42
CLTAP09496 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.92■■□□□ 1.42
CLTAP09496 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
CLTAP09496 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.92■■□□□ 1.42
CLTAP09496 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CLTAP09496 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
CLTAP09496 CLDN5-201ENST00000403084 2357 ntBASIC23.92■■□□□ 1.42
CLTAP09496 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CLTAP09496 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CLTAP09496 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.91■■□□□ 1.42
CLTAP09496 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
CLTAP09496 IGHV3-19-201ENST00000521488 291 ntBASIC23.91■■□□□ 1.42
CLTAP09496 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.91■■□□□ 1.42
CLTAP09496 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.91■■□□□ 1.42
CLTAP09496 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
CLTAP09496 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
CLTAP09496 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.91■■□□□ 1.42
CLTAP09496 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.91■■□□□ 1.42
CLTAP09496 C9orf163-202ENST00000624034 2573 ntBASIC23.91■■□□□ 1.42
CLTAP09496 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CLTAP09496 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.9■■□□□ 1.42
CLTAP09496 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CLTAP09496 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CLTAP09496 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
CLTAP09496 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CLTAP09496 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.9■■□□□ 1.42
CLTAP09496 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CLTAP09496 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.9■■□□□ 1.42
CLTAP09496 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.9■■□□□ 1.42
CLTAP09496 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CLTAP09496 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CLTAP09496 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CLTAP09496 TSPY26P-201ENST00000476365 1326 ntBASIC23.89■■□□□ 1.42
CLTAP09496 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.89■■□□□ 1.42
CLTAP09496 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.42
CLTAP09496 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
CLTAP09496 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
CLTAP09496 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.89■■□□□ 1.41
CLTAP09496 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.89■■□□□ 1.41
CLTAP09496 AL031602.1-201ENST00000633169 911 ntBASIC23.89■■□□□ 1.41
CLTAP09496 AC068587.7-201ENST00000641602 218 ntBASIC23.89■■□□□ 1.41
CLTAP09496 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
CLTAP09496 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
CLTAP09496 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CLTAP09496 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.89■■□□□ 1.41
CLTAP09496 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CLTAP09496 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.88■■□□□ 1.41
CLTAP09496 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CLTAP09496 IRS3P-201ENST00000223076 1006 ntBASIC23.88■■□□□ 1.41
CLTAP09496 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CLTAP09496 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CLTAP09496 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CLTAP09496 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.88■■□□□ 1.41
CLTAP09496 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CLTAP09496 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.88■■□□□ 1.41
CLTAP09496 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CLTAP09496 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.88■■□□□ 1.41
CLTAP09496 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
CLTAP09496 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.87■■□□□ 1.41
CLTAP09496 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.87■■□□□ 1.41
CLTAP09496 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.87■■□□□ 1.41
CLTAP09496 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CLTAP09496 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.87■■□□□ 1.41
CLTAP09496 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CLTAP09496 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CLTAP09496 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.87■■□□□ 1.41
CLTAP09496 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.87■■□□□ 1.41
CLTAP09496 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.86■■□□□ 1.41
CLTAP09496 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
CLTAP09496 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.86■■□□□ 1.41
CLTAP09496 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
CLTAP09496 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CLTAP09496 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.86■■□□□ 1.41
CLTAP09496 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.86■■□□□ 1.41
CLTAP09496 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.86■■□□□ 1.41
CLTAP09496 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.86■■□□□ 1.41
CLTAP09496 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
CLTAP09496 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CLTAP09496 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
CLTAP09496 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CLTAP09496 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CLTAP09496 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.85■■□□□ 1.41
CLTAP09496 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.85■■□□□ 1.41
CLTAP09496 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CLTAP09496 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
CLTAP09496 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.84■■□□□ 1.41
CLTAP09496 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CLTAP09496 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CLTAP09496 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.84■■□□□ 1.41
CLTAP09496 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms