Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.61■□□□□ 0.73
MRPL3P09001 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
MRPL3P09001 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
MRPL3P09001 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
MRPL3P09001 LINC01960-201ENST00000563759 1884 ntBASIC19.6■□□□□ 0.73
MRPL3P09001 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
MRPL3P09001 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MRPL3P09001 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MRPL3P09001 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
MRPL3P09001 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MRPL3P09001 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.6■□□□□ 0.73
MRPL3P09001 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.6■□□□□ 0.73
MRPL3P09001 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.6■□□□□ 0.73
MRPL3P09001 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.6■□□□□ 0.73
MRPL3P09001 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.6■□□□□ 0.73
MRPL3P09001 AL031848.2-201ENST00000607670 837 ntBASIC19.6■□□□□ 0.73
MRPL3P09001 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.6■□□□□ 0.73
MRPL3P09001 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MRPL3P09001 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MRPL3P09001 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MRPL3P09001 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MRPL3P09001 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
MRPL3P09001 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MRPL3P09001 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MRPL3P09001 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.59■□□□□ 0.73
MRPL3P09001 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.59■□□□□ 0.73
MRPL3P09001 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.59■□□□□ 0.73
MRPL3P09001 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MRPL3P09001 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MRPL3P09001 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MRPL3P09001 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MRPL3P09001 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MRPL3P09001 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.58■□□□□ 0.73
MRPL3P09001 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
MRPL3P09001 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MRPL3P09001 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
MRPL3P09001 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.58■□□□□ 0.72
MRPL3P09001 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.58■□□□□ 0.72
MRPL3P09001 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.58■□□□□ 0.72
MRPL3P09001 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
MRPL3P09001 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
MRPL3P09001 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.58■□□□□ 0.72
MRPL3P09001 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
MRPL3P09001 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
MRPL3P09001 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MRPL3P09001 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
MRPL3P09001 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
MRPL3P09001 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MRPL3P09001 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MRPL3P09001 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
MRPL3P09001 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
MRPL3P09001 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MRPL3P09001 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
MRPL3P09001 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
MRPL3P09001 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MRPL3P09001 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.57■□□□□ 0.72
MRPL3P09001 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
MRPL3P09001 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.57■□□□□ 0.72
MRPL3P09001 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.57■□□□□ 0.72
MRPL3P09001 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MRPL3P09001 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MRPL3P09001 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.57■□□□□ 0.72
MRPL3P09001 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
MRPL3P09001 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MRPL3P09001 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
MRPL3P09001 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MRPL3P09001 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MRPL3P09001 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.56■□□□□ 0.72
MRPL3P09001 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MRPL3P09001 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.56■□□□□ 0.72
MRPL3P09001 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MRPL3P09001 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.56■□□□□ 0.72
MRPL3P09001 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MRPL3P09001 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.56■□□□□ 0.72
MRPL3P09001 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MRPL3P09001 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MRPL3P09001 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.56■□□□□ 0.72
MRPL3P09001 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
MRPL3P09001 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MRPL3P09001 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MRPL3P09001 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MRPL3P09001 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MRPL3P09001 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.55■□□□□ 0.72
MRPL3P09001 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.55■□□□□ 0.72
MRPL3P09001 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
MRPL3P09001 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MRPL3P09001 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.55■□□□□ 0.72
MRPL3P09001 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MRPL3P09001 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
MRPL3P09001 MIR6722-201ENST00000617286 78 ntBASIC19.55■□□□□ 0.72
MRPL3P09001 AC009086.3-201ENST00000623486 1008 ntBASIC19.55■□□□□ 0.72
MRPL3P09001 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.55■□□□□ 0.72
MRPL3P09001 FAM99A-202ENST00000538190 1989 ntBASIC19.55■□□□□ 0.72
MRPL3P09001 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
MRPL3P09001 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MRPL3P09001 FP325331.1-202ENST00000623531 1380 ntBASIC19.55■□□□□ 0.72
MRPL3P09001 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MRPL3P09001 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.55■□□□□ 0.72
MRPL3P09001 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
MRPL3P09001 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms