Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 AL162430.1-201ENST00000480705 870 ntBASIC19.73■□□□□ 0.75
RAF1P04049 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.73■□□□□ 0.75
RAF1P04049 AC027682.1-201ENST00000562846 899 ntBASIC19.73■□□□□ 0.75
RAF1P04049 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAF1P04049 AC087623.3-201ENST00000607047 1098 ntBASIC19.73■□□□□ 0.75
RAF1P04049 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAF1P04049 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAF1P04049 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
RAF1P04049 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAF1P04049 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAF1P04049 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RAF1P04049 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAF1P04049 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
RAF1P04049 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
RAF1P04049 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RAF1P04049 ESRRAP2-201ENST00000418437 1549 ntBASIC19.72■□□□□ 0.75
RAF1P04049 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.72■□□□□ 0.75
RAF1P04049 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAF1P04049 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAF1P04049 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAF1P04049 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
RAF1P04049 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAF1P04049 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.72■□□□□ 0.75
RAF1P04049 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAF1P04049 ALDH1A3-203ENST00000557963 1670 ntBASIC19.71■□□□□ 0.75
RAF1P04049 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.71■□□□□ 0.75
RAF1P04049 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAF1P04049 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAF1P04049 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.71■□□□□ 0.75
RAF1P04049 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RAF1P04049 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAF1P04049 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAF1P04049 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAF1P04049 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RAF1P04049 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.71■□□□□ 0.75
RAF1P04049 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
RAF1P04049 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAF1P04049 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAF1P04049 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.71■□□□□ 0.75
RAF1P04049 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAF1P04049 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.71■□□□□ 0.75
RAF1P04049 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RAF1P04049 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAF1P04049 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAF1P04049 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAF1P04049 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAF1P04049 AL121603.2-201ENST00000557373 2117 ntBASIC19.7■□□□□ 0.74
RAF1P04049 AC007375.3-201ENST00000600936 2314 ntBASIC19.7■□□□□ 0.74
RAF1P04049 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RAF1P04049 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAF1P04049 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAF1P04049 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAF1P04049 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RAF1P04049 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RAF1P04049 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.7■□□□□ 0.74
RAF1P04049 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
RAF1P04049 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAF1P04049 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RAF1P04049 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAF1P04049 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.7■□□□□ 0.74
RAF1P04049 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.7■□□□□ 0.74
RAF1P04049 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAF1P04049 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAF1P04049 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAF1P04049 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAF1P04049 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.69■□□□□ 0.74
RAF1P04049 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAF1P04049 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAF1P04049 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.68■□□□□ 0.74
RAF1P04049 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAF1P04049 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAF1P04049 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAF1P04049 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAF1P04049 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.68■□□□□ 0.74
RAF1P04049 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAF1P04049 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.68■□□□□ 0.74
RAF1P04049 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.68■□□□□ 0.74
RAF1P04049 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAF1P04049 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.68■□□□□ 0.74
RAF1P04049 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
RAF1P04049 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAF1P04049 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.67■□□□□ 0.74
RAF1P04049 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAF1P04049 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAF1P04049 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAF1P04049 IRS3P-201ENST00000223076 1006 ntBASIC19.67■□□□□ 0.74
RAF1P04049 SERBP1P1-201ENST00000396021 1160 ntBASIC19.67■□□□□ 0.74
RAF1P04049 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.67■□□□□ 0.74
RAF1P04049 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.67■□□□□ 0.74
RAF1P04049 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAF1P04049 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.67■□□□□ 0.74
RAF1P04049 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RAF1P04049 AC242852.2-201ENST00000615738 1807 ntBASIC19.67■□□□□ 0.74
RAF1P04049 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RAF1P04049 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAF1P04049 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.66■□□□□ 0.74
RAF1P04049 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.66■□□□□ 0.74
RAF1P04049 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAF1P04049 AL138724.1-201ENST00000606771 1088 ntBASIC19.66■□□□□ 0.74
RAF1P04049 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms