Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19■□□□□ 0.63
MT-ND4P03905 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19■□□□□ 0.63
MT-ND4P03905 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19■□□□□ 0.63
MT-ND4P03905 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MT-ND4P03905 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19■□□□□ 0.63
MT-ND4P03905 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
MT-ND4P03905 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19■□□□□ 0.63
MT-ND4P03905 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
MT-ND4P03905 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
MT-ND4P03905 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
MT-ND4P03905 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MT-ND4P03905 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MT-ND4P03905 FAM99A-202ENST00000538190 1989 ntBASIC19■□□□□ 0.63
MT-ND4P03905 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19■□□□□ 0.63
MT-ND4P03905 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
MT-ND4P03905 AC005229.4-201ENST00000610085 2198 ntBASIC19■□□□□ 0.63
MT-ND4P03905 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19■□□□□ 0.63
MT-ND4P03905 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19■□□□□ 0.63
MT-ND4P03905 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MT-ND4P03905 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19■□□□□ 0.63
MT-ND4P03905 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MT-ND4P03905 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MT-ND4P03905 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
MT-ND4P03905 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
MT-ND4P03905 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
MT-ND4P03905 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MT-ND4P03905 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.99■□□□□ 0.63
MT-ND4P03905 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MT-ND4P03905 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MT-ND4P03905 AF131216.4-201ENST00000638924 1588 ntBASIC18.99■□□□□ 0.63
MT-ND4P03905 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.99■□□□□ 0.63
MT-ND4P03905 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MT-ND4P03905 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MT-ND4P03905 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.99■□□□□ 0.63
MT-ND4P03905 MIR4281-201ENST00000580852 62 ntBASIC18.99■□□□□ 0.63
MT-ND4P03905 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MT-ND4P03905 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.99■□□□□ 0.63
MT-ND4P03905 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MT-ND4P03905 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MT-ND4P03905 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
MT-ND4P03905 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MT-ND4P03905 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
MT-ND4P03905 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MT-ND4P03905 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.98■□□□□ 0.63
MT-ND4P03905 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MT-ND4P03905 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
MT-ND4P03905 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.98■□□□□ 0.63
MT-ND4P03905 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MT-ND4P03905 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.98■□□□□ 0.63
MT-ND4P03905 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.98■□□□□ 0.63
MT-ND4P03905 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.98■□□□□ 0.63
MT-ND4P03905 AL033527.3-201ENST00000566366 1196 ntBASIC18.98■□□□□ 0.63
MT-ND4P03905 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.98■□□□□ 0.63
MT-ND4P03905 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
MT-ND4P03905 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
MT-ND4P03905 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MT-ND4P03905 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MT-ND4P03905 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MT-ND4P03905 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MT-ND4P03905 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MT-ND4P03905 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MT-ND4P03905 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.97■□□□□ 0.63
MT-ND4P03905 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MT-ND4P03905 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.97■□□□□ 0.63
MT-ND4P03905 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.97■□□□□ 0.63
MT-ND4P03905 MIR4508-201ENST00000584178 70 ntBASIC18.97■□□□□ 0.63
MT-ND4P03905 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.97■□□□□ 0.63
MT-ND4P03905 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MT-ND4P03905 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.97■□□□□ 0.63
MT-ND4P03905 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MT-ND4P03905 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
MT-ND4P03905 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MT-ND4P03905 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MT-ND4P03905 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.97■□□□□ 0.63
MT-ND4P03905 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.96■□□□□ 0.63
MT-ND4P03905 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
MT-ND4P03905 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
MT-ND4P03905 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MT-ND4P03905 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MT-ND4P03905 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MT-ND4P03905 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
MT-ND4P03905 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MT-ND4P03905 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
MT-ND4P03905 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MT-ND4P03905 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
MT-ND4P03905 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MT-ND4P03905 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MT-ND4P03905 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MT-ND4P03905 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MT-ND4P03905 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
MT-ND4P03905 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.95■□□□□ 0.62
MT-ND4P03905 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.95■□□□□ 0.62
MT-ND4P03905 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MT-ND4P03905 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MT-ND4P03905 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.95■□□□□ 0.62
MT-ND4P03905 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MT-ND4P03905 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MT-ND4P03905 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.95■□□□□ 0.62
MT-ND4P03905 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.95■□□□□ 0.62
MT-ND4P03905 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms