Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV12-3P01733 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV12-3P01733 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV12-3P01733 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC16.94■□□□□ 0.3
TRBV12-3P01733 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV12-3P01733 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV12-3P01733 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV12-3P01733 AC087742.1-201ENST00000575880 1738 ntBASIC16.93■□□□□ 0.3
TRBV12-3P01733 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC16.93■□□□□ 0.3
TRBV12-3P01733 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV12-3P01733 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV12-3P01733 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC16.93■□□□□ 0.3
TRBV12-3P01733 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV12-3P01733 EI24-211ENST00000534546 1544 ntTSL 2 BASIC16.93■□□□□ 0.3
TRBV12-3P01733 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TRBV12-3P01733 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
TRBV12-3P01733 AC099791.1-201ENST00000416440 715 ntBASIC16.93■□□□□ 0.3
TRBV12-3P01733 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TRBV12-3P01733 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC16.93■□□□□ 0.3
TRBV12-3P01733 AC133561.4-201ENST00000566112 224 ntBASIC16.93■□□□□ 0.3
TRBV12-3P01733 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC16.93■□□□□ 0.3
TRBV12-3P01733 AC233992.3-201ENST00000607491 485 ntBASIC16.93■□□□□ 0.3
TRBV12-3P01733 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV12-3P01733 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV12-3P01733 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV12-3P01733 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV12-3P01733 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TRBV12-3P01733 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
TRBV12-3P01733 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV12-3P01733 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
TRBV12-3P01733 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV12-3P01733 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRBV12-3P01733 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV12-3P01733 MIR939-201ENST00000401314 82 ntBASIC16.92■□□□□ 0.3
TRBV12-3P01733 SUDS3P1-201ENST00000505831 966 ntBASIC16.92■□□□□ 0.3
TRBV12-3P01733 AL136967.2-201ENST00000623968 743 ntBASIC16.92■□□□□ 0.3
TRBV12-3P01733 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV12-3P01733 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRBV12-3P01733 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRBV12-3P01733 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV12-3P01733 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV12-3P01733 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV12-3P01733 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TRBV12-3P01733 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV12-3P01733 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TRBV12-3P01733 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV12-3P01733 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV12-3P01733 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV12-3P01733 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC16.91■□□□□ 0.3
TRBV12-3P01733 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC16.91■□□□□ 0.3
TRBV12-3P01733 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV12-3P01733 AC142381.2-201ENST00000566120 298 ntBASIC16.91■□□□□ 0.3
TRBV12-3P01733 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV12-3P01733 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV12-3P01733 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV12-3P01733 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV12-3P01733 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC16.9■□□□□ 0.3
TRBV12-3P01733 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV12-3P01733 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV12-3P01733 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV12-3P01733 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV12-3P01733 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.9■□□□□ 0.3
TRBV12-3P01733 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV12-3P01733 AC027682.1-201ENST00000562846 899 ntBASIC16.9■□□□□ 0.3
TRBV12-3P01733 AC126544.1-201ENST00000580842 1059 ntBASIC16.9■□□□□ 0.3
TRBV12-3P01733 AL031602.1-201ENST00000633169 911 ntBASIC16.9■□□□□ 0.3
TRBV12-3P01733 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC16.9■□□□□ 0.3
TRBV12-3P01733 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV12-3P01733 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV12-3P01733 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TRBV12-3P01733 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC16.9■□□□□ 0.3
TRBV12-3P01733 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV12-3P01733 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC16.9■□□□□ 0.3
TRBV12-3P01733 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
TRBV12-3P01733 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV12-3P01733 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRBV12-3P01733 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
TRBV12-3P01733 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV12-3P01733 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV12-3P01733 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV12-3P01733 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
TRBV12-3P01733 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC16.89■□□□□ 0.29
TRBV12-3P01733 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TRBV12-3P01733 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC16.89■□□□□ 0.29
TRBV12-3P01733 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC16.89■□□□□ 0.29
TRBV12-3P01733 AC233723.2-201ENST00000623798 2106 ntBASIC16.89■□□□□ 0.29
TRBV12-3P01733 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV12-3P01733 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV12-3P01733 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV12-3P01733 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TRBV12-3P01733 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV12-3P01733 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TRBV12-3P01733 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC16.88■□□□□ 0.29
TRBV12-3P01733 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC16.88■□□□□ 0.29
TRBV12-3P01733 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV12-3P01733 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV12-3P01733 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TRBV12-3P01733 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV12-3P01733 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV12-3P01733 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms