Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.08■■□□□ 1.29
RTN3O95197 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RTN3O95197 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RTN3O95197 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.08■■□□□ 1.29
RTN3O95197 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RTN3O95197 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.08■■□□□ 1.29
RTN3O95197 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.08■■□□□ 1.29
RTN3O95197 MIR6821-201ENST00000617625 74 ntBASIC23.08■■□□□ 1.29
RTN3O95197 AC087239.1-201ENST00000622671 572 ntBASIC23.08■■□□□ 1.29
RTN3O95197 AL031602.1-201ENST00000633169 911 ntBASIC23.08■■□□□ 1.29
RTN3O95197 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.08■■□□□ 1.29
RTN3O95197 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
RTN3O95197 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
RTN3O95197 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.08■■□□□ 1.28
RTN3O95197 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.07■■□□□ 1.28
RTN3O95197 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.07■■□□□ 1.28
RTN3O95197 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RTN3O95197 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.07■■□□□ 1.28
RTN3O95197 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
RTN3O95197 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RTN3O95197 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RTN3O95197 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RTN3O95197 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.07■■□□□ 1.28
RTN3O95197 AC097381.1-201ENST00000429019 1296 ntBASIC23.07■■□□□ 1.28
RTN3O95197 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.07■■□□□ 1.28
RTN3O95197 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC23.07■■□□□ 1.28
RTN3O95197 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.07■■□□□ 1.28
RTN3O95197 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RTN3O95197 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.07■■□□□ 1.28
RTN3O95197 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RTN3O95197 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RTN3O95197 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
RTN3O95197 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.07■■□□□ 1.28
RTN3O95197 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.06■■□□□ 1.28
RTN3O95197 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RTN3O95197 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RTN3O95197 AL354811.1-201ENST00000610286 706 ntBASIC23.06■■□□□ 1.28
RTN3O95197 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
RTN3O95197 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
RTN3O95197 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RTN3O95197 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.06■■□□□ 1.28
RTN3O95197 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
RTN3O95197 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RTN3O95197 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RTN3O95197 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.05■■□□□ 1.28
RTN3O95197 AC012414.1-201ENST00000556676 535 ntBASIC23.05■■□□□ 1.28
RTN3O95197 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RTN3O95197 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.05■■□□□ 1.28
RTN3O95197 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RTN3O95197 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.05■■□□□ 1.28
RTN3O95197 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
RTN3O95197 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RTN3O95197 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
RTN3O95197 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RTN3O95197 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
RTN3O95197 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RTN3O95197 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RTN3O95197 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
RTN3O95197 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
RTN3O95197 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.04■■□□□ 1.28
RTN3O95197 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.04■■□□□ 1.28
RTN3O95197 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
RTN3O95197 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.04■■□□□ 1.28
RTN3O95197 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC23.04■■□□□ 1.28
RTN3O95197 MIR5787-201ENST00000611784 55 ntBASIC23.04■■□□□ 1.28
RTN3O95197 SP2-202ENST00000613139 908 ntTSL 5 BASIC23.04■■□□□ 1.28
RTN3O95197 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RTN3O95197 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.04■■□□□ 1.28
RTN3O95197 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
RTN3O95197 DUSP8P3-201ENST00000399571 1760 ntBASIC23.04■■□□□ 1.28
RTN3O95197 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
RTN3O95197 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTN3O95197 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTN3O95197 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.03■■□□□ 1.28
RTN3O95197 AC010141.3-201ENST00000456659 717 ntBASIC23.03■■□□□ 1.28
RTN3O95197 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTN3O95197 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTN3O95197 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTN3O95197 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
RTN3O95197 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
RTN3O95197 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
RTN3O95197 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RTN3O95197 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RTN3O95197 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RTN3O95197 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RTN3O95197 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RTN3O95197 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.02■■□□□ 1.28
RTN3O95197 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RTN3O95197 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.01■■□□□ 1.27
RTN3O95197 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RTN3O95197 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.01■■□□□ 1.27
RTN3O95197 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RTN3O95197 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.01■■□□□ 1.27
RTN3O95197 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RTN3O95197 AC027612.3-201ENST00000413684 1047 ntBASIC23.01■■□□□ 1.27
RTN3O95197 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RTN3O95197 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RTN3O95197 AC105233.4-201ENST00000642045 216 ntBASIC23.01■■□□□ 1.27
RTN3O95197 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RTN3O95197 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms