Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
BEST1O76090 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
BEST1O76090 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
BEST1O76090 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
BEST1O76090 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
BEST1O76090 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
BEST1O76090 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
BEST1O76090 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
BEST1O76090 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
BEST1O76090 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.11■■□□□ 1.29
BEST1O76090 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
BEST1O76090 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
BEST1O76090 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
BEST1O76090 LINC01960-201ENST00000563759 1884 ntBASIC23.11■■□□□ 1.29
BEST1O76090 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
BEST1O76090 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
BEST1O76090 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.11■■□□□ 1.29
BEST1O76090 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
BEST1O76090 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
BEST1O76090 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
BEST1O76090 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
BEST1O76090 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
BEST1O76090 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
BEST1O76090 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.1■■□□□ 1.29
BEST1O76090 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
BEST1O76090 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.1■■□□□ 1.29
BEST1O76090 JTB-203ENST00000368589 1216 ntTSL 2 BASIC23.1■■□□□ 1.29
BEST1O76090 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
BEST1O76090 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
BEST1O76090 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
BEST1O76090 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
BEST1O76090 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.1■■□□□ 1.29
BEST1O76090 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.1■■□□□ 1.29
BEST1O76090 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
BEST1O76090 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
BEST1O76090 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
BEST1O76090 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.09■■□□□ 1.29
BEST1O76090 MIR572-201ENST00000384983 95 ntBASIC23.09■■□□□ 1.29
BEST1O76090 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
BEST1O76090 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
BEST1O76090 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.09■■□□□ 1.29
BEST1O76090 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.09■■□□□ 1.29
BEST1O76090 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.08■■□□□ 1.29
BEST1O76090 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
BEST1O76090 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
BEST1O76090 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
BEST1O76090 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.08■■□□□ 1.29
BEST1O76090 AC068587.7-201ENST00000641602 218 ntBASIC23.08■■□□□ 1.29
BEST1O76090 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.08■■□□□ 1.29
BEST1O76090 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
BEST1O76090 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
BEST1O76090 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
BEST1O76090 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.07■■□□□ 1.28
BEST1O76090 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
BEST1O76090 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC23.07■■□□□ 1.28
BEST1O76090 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
BEST1O76090 C1orf229-201ENST00000623686 2258 ntBASIC23.07■■□□□ 1.28
BEST1O76090 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.07■■□□□ 1.28
BEST1O76090 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
BEST1O76090 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.07■■□□□ 1.28
BEST1O76090 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
BEST1O76090 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
BEST1O76090 AC087742.1-201ENST00000575880 1738 ntBASIC23.06■■□□□ 1.28
BEST1O76090 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
BEST1O76090 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
BEST1O76090 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
BEST1O76090 AC010141.3-201ENST00000456659 717 ntBASIC23.06■■□□□ 1.28
BEST1O76090 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
BEST1O76090 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
BEST1O76090 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.06■■□□□ 1.28
BEST1O76090 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
BEST1O76090 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
BEST1O76090 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
BEST1O76090 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
BEST1O76090 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.05■■□□□ 1.28
BEST1O76090 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.05■■□□□ 1.28
BEST1O76090 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.05■■□□□ 1.28
BEST1O76090 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.05■■□□□ 1.28
BEST1O76090 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.05■■□□□ 1.28
BEST1O76090 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.05■■□□□ 1.28
BEST1O76090 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.05■■□□□ 1.28
BEST1O76090 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
BEST1O76090 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.05■■□□□ 1.28
BEST1O76090 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.05■■□□□ 1.28
BEST1O76090 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
BEST1O76090 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
BEST1O76090 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
BEST1O76090 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.04■■□□□ 1.28
BEST1O76090 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
BEST1O76090 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
BEST1O76090 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.04■■□□□ 1.28
BEST1O76090 AC026271.2-201ENST00000428091 497 ntBASIC23.04■■□□□ 1.28
BEST1O76090 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC23.04■■□□□ 1.28
BEST1O76090 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
BEST1O76090 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
BEST1O76090 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
BEST1O76090 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
BEST1O76090 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
BEST1O76090 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
BEST1O76090 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms