Protein–RNA interactions for Protein: O75452

RDH16, Retinol dehydrogenase 16, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH16O75452 LINC01960-201ENST00000563759 1884 ntBASIC20.75■□□□□ 0.91
RDH16O75452 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RDH16O75452 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.74■□□□□ 0.91
RDH16O75452 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RDH16O75452 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
RDH16O75452 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.74■□□□□ 0.91
RDH16O75452 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RDH16O75452 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.74■□□□□ 0.91
RDH16O75452 IGHV3-19-201ENST00000521488 291 ntBASIC20.74■□□□□ 0.91
RDH16O75452 AP005435.1-201ENST00000529293 1178 ntBASIC20.74■□□□□ 0.91
RDH16O75452 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RDH16O75452 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
RDH16O75452 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RDH16O75452 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.74■□□□□ 0.91
RDH16O75452 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RDH16O75452 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.74■□□□□ 0.91
RDH16O75452 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RDH16O75452 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.74■□□□□ 0.91
RDH16O75452 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RDH16O75452 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RDH16O75452 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
RDH16O75452 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RDH16O75452 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RDH16O75452 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RDH16O75452 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RDH16O75452 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.73■□□□□ 0.91
RDH16O75452 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.73■□□□□ 0.91
RDH16O75452 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.73■□□□□ 0.91
RDH16O75452 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RDH16O75452 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RDH16O75452 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RDH16O75452 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
RDH16O75452 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RDH16O75452 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RDH16O75452 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RDH16O75452 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RDH16O75452 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.72■□□□□ 0.91
RDH16O75452 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.72■□□□□ 0.91
RDH16O75452 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.72■□□□□ 0.91
RDH16O75452 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
RDH16O75452 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.72■□□□□ 0.91
RDH16O75452 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RDH16O75452 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
RDH16O75452 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RDH16O75452 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RDH16O75452 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RDH16O75452 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RDH16O75452 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RDH16O75452 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.71■□□□□ 0.91
RDH16O75452 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.71■□□□□ 0.91
RDH16O75452 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RDH16O75452 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RDH16O75452 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.71■□□□□ 0.91
RDH16O75452 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.71■□□□□ 0.91
RDH16O75452 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RDH16O75452 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RDH16O75452 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RDH16O75452 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RDH16O75452 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RDH16O75452 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RDH16O75452 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RDH16O75452 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RDH16O75452 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RDH16O75452 AC068587.7-201ENST00000641602 218 ntBASIC20.7■□□□□ 0.9
RDH16O75452 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.7■□□□□ 0.9
RDH16O75452 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RDH16O75452 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.7■□□□□ 0.9
RDH16O75452 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RDH16O75452 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RDH16O75452 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.69■□□□□ 0.9
RDH16O75452 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RDH16O75452 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.69■□□□□ 0.9
RDH16O75452 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.69■□□□□ 0.9
RDH16O75452 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.69■□□□□ 0.9
RDH16O75452 AC087239.1-201ENST00000622671 572 ntBASIC20.69■□□□□ 0.9
RDH16O75452 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.69■□□□□ 0.9
RDH16O75452 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RDH16O75452 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.69■□□□□ 0.9
RDH16O75452 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.69■□□□□ 0.9
RDH16O75452 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.69■□□□□ 0.9
RDH16O75452 C1orf229-201ENST00000623686 2258 ntBASIC20.69■□□□□ 0.9
RDH16O75452 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RDH16O75452 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RDH16O75452 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.69■□□□□ 0.9
RDH16O75452 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RDH16O75452 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.68■□□□□ 0.9
RDH16O75452 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.68■□□□□ 0.9
RDH16O75452 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RDH16O75452 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RDH16O75452 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.68■□□□□ 0.9
RDH16O75452 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RDH16O75452 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RDH16O75452 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.67■□□□□ 0.9
RDH16O75452 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RDH16O75452 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RDH16O75452 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RDH16O75452 AC010141.3-201ENST00000456659 717 ntBASIC20.67■□□□□ 0.9
RDH16O75452 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.67■□□□□ 0.9
RDH16O75452 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.67■□□□□ 0.9
RDH16O75452 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms