Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC34.21■■■■□ 3.07
PLEKHD1A6NEE1 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC34.21■■■■□ 3.07
PLEKHD1A6NEE1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC34.2■■■■□ 3.07
PLEKHD1A6NEE1 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC34.2■■■■□ 3.07
PLEKHD1A6NEE1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC34.2■■■■□ 3.07
PLEKHD1A6NEE1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC34.2■■■■□ 3.06
PLEKHD1A6NEE1 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.06
PLEKHD1A6NEE1 OXCT2P1-201ENST00000447263 1535 ntBASIC34.2■■■■□ 3.06
PLEKHD1A6NEE1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC34.19■■■■□ 3.06
PLEKHD1A6NEE1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC34.19■■■■□ 3.06
PLEKHD1A6NEE1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC34.19■■■■□ 3.06
PLEKHD1A6NEE1 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC34.19■■■■□ 3.06
PLEKHD1A6NEE1 CD99P1-205ENST00000527459 561 ntBASIC34.19■■■■□ 3.06
PLEKHD1A6NEE1 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC34.19■■■■□ 3.06
PLEKHD1A6NEE1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC34.19■■■■□ 3.06
PLEKHD1A6NEE1 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
PLEKHD1A6NEE1 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
PLEKHD1A6NEE1 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC34.18■■■■□ 3.06
PLEKHD1A6NEE1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC34.18■■■■□ 3.06
PLEKHD1A6NEE1 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC34.18■■■■□ 3.06
PLEKHD1A6NEE1 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC34.18■■■■□ 3.06
PLEKHD1A6NEE1 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC34.18■■■■□ 3.06
PLEKHD1A6NEE1 AL050303.2-201ENST00000619798 666 ntBASIC34.18■■■■□ 3.06
PLEKHD1A6NEE1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC34.18■■■■□ 3.06
PLEKHD1A6NEE1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC34.18■■■■□ 3.06
PLEKHD1A6NEE1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC34.18■■■■□ 3.06
PLEKHD1A6NEE1 AC142381.3-201ENST00000568208 1670 ntBASIC34.18■■■■□ 3.06
PLEKHD1A6NEE1 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC34.18■■■■□ 3.06
PLEKHD1A6NEE1 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC34.18■■■■□ 3.06
PLEKHD1A6NEE1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC34.17■■■■□ 3.06
PLEKHD1A6NEE1 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
PLEKHD1A6NEE1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC34.17■■■■□ 3.06
PLEKHD1A6NEE1 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC34.17■■■■□ 3.06
PLEKHD1A6NEE1 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC34.17■■■■□ 3.06
PLEKHD1A6NEE1 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC34.16■■■■□ 3.06
PLEKHD1A6NEE1 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC34.16■■■■□ 3.06
PLEKHD1A6NEE1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC34.16■■■■□ 3.06
PLEKHD1A6NEE1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC34.16■■■■□ 3.06
PLEKHD1A6NEE1 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC34.16■■■■□ 3.06
PLEKHD1A6NEE1 MED17-227ENST00000640521 2047 ntTSL 5 BASIC34.16■■■■□ 3.06
PLEKHD1A6NEE1 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC34.15■■■■□ 3.06
PLEKHD1A6NEE1 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
PLEKHD1A6NEE1 APTR-205ENST00000447009 902 ntTSL 2 BASIC34.15■■■■□ 3.06
PLEKHD1A6NEE1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC34.15■■■■□ 3.06
PLEKHD1A6NEE1 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC34.15■■■■□ 3.06
PLEKHD1A6NEE1 AL121832.2-201ENST00000610979 668 ntBASIC34.15■■■■□ 3.06
PLEKHD1A6NEE1 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC34.15■■■■□ 3.06
PLEKHD1A6NEE1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC34.15■■■■□ 3.06
PLEKHD1A6NEE1 ASL-203ENST00000380839 1765 ntTSL 5 BASIC34.15■■■■□ 3.06
PLEKHD1A6NEE1 EED-207ENST00000528180 1745 ntTSL 5 BASIC34.15■■■■□ 3.06
PLEKHD1A6NEE1 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC34.15■■■■□ 3.06
PLEKHD1A6NEE1 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC34.15■■■■□ 3.06
PLEKHD1A6NEE1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC34.14■■■■□ 3.06
PLEKHD1A6NEE1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC34.14■■■■□ 3.06
PLEKHD1A6NEE1 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC34.14■■■■□ 3.06
PLEKHD1A6NEE1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC34.14■■■■□ 3.06
PLEKHD1A6NEE1 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
PLEKHD1A6NEE1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC34.14■■■■□ 3.06
PLEKHD1A6NEE1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC34.13■■■■□ 3.05
PLEKHD1A6NEE1 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC34.13■■■■□ 3.05
PLEKHD1A6NEE1 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC34.13■■■■□ 3.05
PLEKHD1A6NEE1 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC34.13■■■■□ 3.05
PLEKHD1A6NEE1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC34.12■■■■□ 3.05
PLEKHD1A6NEE1 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC34.12■■■■□ 3.05
PLEKHD1A6NEE1 AC083906.2-201ENST00000511578 360 ntBASIC34.12■■■■□ 3.05
PLEKHD1A6NEE1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC34.12■■■■□ 3.05
PLEKHD1A6NEE1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC34.12■■■■□ 3.05
PLEKHD1A6NEE1 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
PLEKHD1A6NEE1 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
PLEKHD1A6NEE1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
PLEKHD1A6NEE1 TSPY6P-201ENST00000448518 926 ntBASIC34.11■■■■□ 3.05
PLEKHD1A6NEE1 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
PLEKHD1A6NEE1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
PLEKHD1A6NEE1 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC34.1■■■■□ 3.05
PLEKHD1A6NEE1 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC34.1■■■■□ 3.05
PLEKHD1A6NEE1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC34.1■■■■□ 3.05
PLEKHD1A6NEE1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC34.1■■■■□ 3.05
PLEKHD1A6NEE1 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC34.1■■■■□ 3.05
PLEKHD1A6NEE1 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC34.09■■■■□ 3.05
PLEKHD1A6NEE1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC34.09■■■■□ 3.05
PLEKHD1A6NEE1 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC34.09■■■■□ 3.05
PLEKHD1A6NEE1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC34.09■■■■□ 3.05
PLEKHD1A6NEE1 DUX4L16-201ENST00000555130 1264 ntBASIC34.09■■■■□ 3.05
PLEKHD1A6NEE1 AC104187.1-201ENST00000607510 612 ntBASIC34.09■■■■□ 3.05
PLEKHD1A6NEE1 AC231657.2-201ENST00000624556 255 ntBASIC34.09■■■■□ 3.05
PLEKHD1A6NEE1 AL353803.4-201ENST00000565882 1934 ntBASIC34.08■■■■□ 3.05
PLEKHD1A6NEE1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC34.08■■■■□ 3.05
PLEKHD1A6NEE1 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC34.08■■■■□ 3.05
PLEKHD1A6NEE1 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC34.08■■■■□ 3.05
PLEKHD1A6NEE1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC34.08■■■■□ 3.05
PLEKHD1A6NEE1 GUSBP6-202ENST00000438529 1198 ntBASIC34.08■■■■□ 3.05
PLEKHD1A6NEE1 TSPY20P-201ENST00000450910 630 ntBASIC34.08■■■■□ 3.05
PLEKHD1A6NEE1 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
PLEKHD1A6NEE1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC34.08■■■■□ 3.05
PLEKHD1A6NEE1 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC34.08■■■■□ 3.05
PLEKHD1A6NEE1 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC34.08■■■■□ 3.05
PLEKHD1A6NEE1 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC34.07■■■■□ 3.05
PLEKHD1A6NEE1 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC34.07■■■■□ 3.05
PLEKHD1A6NEE1 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.04
PLEKHD1A6NEE1 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC34.07■■■■□ 3.04
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms