Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
TRIM49BA6NDI0 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
TRIM49BA6NDI0 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
TRIM49BA6NDI0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.47
TRIM49BA6NDI0 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
TRIM49BA6NDI0 C11orf96-202ENST00000528572 1834 ntBASIC24.2■■□□□ 1.46
TRIM49BA6NDI0 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC24.2■■□□□ 1.46
TRIM49BA6NDI0 AL499627.2-201ENST00000606283 725 ntBASIC24.2■■□□□ 1.46
TRIM49BA6NDI0 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
TRIM49BA6NDI0 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
TRIM49BA6NDI0 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
TRIM49BA6NDI0 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC24.2■■□□□ 1.46
TRIM49BA6NDI0 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC24.19■■□□□ 1.46
TRIM49BA6NDI0 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
TRIM49BA6NDI0 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.19■■□□□ 1.46
TRIM49BA6NDI0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
TRIM49BA6NDI0 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC24.19■■□□□ 1.46
TRIM49BA6NDI0 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
TRIM49BA6NDI0 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
TRIM49BA6NDI0 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TRIM49BA6NDI0 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC24.19■■□□□ 1.46
TRIM49BA6NDI0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC24.18■■□□□ 1.46
TRIM49BA6NDI0 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC24.18■■□□□ 1.46
TRIM49BA6NDI0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
TRIM49BA6NDI0 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRIM49BA6NDI0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
TRIM49BA6NDI0 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC24.18■■□□□ 1.46
TRIM49BA6NDI0 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC24.18■■□□□ 1.46
TRIM49BA6NDI0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
TRIM49BA6NDI0 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TRIM49BA6NDI0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC24.17■■□□□ 1.46
TRIM49BA6NDI0 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC24.17■■□□□ 1.46
TRIM49BA6NDI0 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TRIM49BA6NDI0 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TRIM49BA6NDI0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TRIM49BA6NDI0 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TRIM49BA6NDI0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRIM49BA6NDI0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC24.16■■□□□ 1.46
TRIM49BA6NDI0 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC24.16■■□□□ 1.46
TRIM49BA6NDI0 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRIM49BA6NDI0 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
TRIM49BA6NDI0 MIR3621-201ENST00000580529 85 ntBASIC24.16■■□□□ 1.46
TRIM49BA6NDI0 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
TRIM49BA6NDI0 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
TRIM49BA6NDI0 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRIM49BA6NDI0 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRIM49BA6NDI0 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRIM49BA6NDI0 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC24.16■■□□□ 1.46
TRIM49BA6NDI0 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRIM49BA6NDI0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC24.15■■□□□ 1.46
TRIM49BA6NDI0 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRIM49BA6NDI0 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRIM49BA6NDI0 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRIM49BA6NDI0 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.15■■□□□ 1.46
TRIM49BA6NDI0 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TRIM49BA6NDI0 QDPR-206ENST00000508623 601 ntTSL 3 BASIC24.15■■□□□ 1.46
TRIM49BA6NDI0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRIM49BA6NDI0 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC24.15■■□□□ 1.46
TRIM49BA6NDI0 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRIM49BA6NDI0 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRIM49BA6NDI0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
TRIM49BA6NDI0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.46
TRIM49BA6NDI0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC24.14■■□□□ 1.46
TRIM49BA6NDI0 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
TRIM49BA6NDI0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC24.14■■□□□ 1.46
TRIM49BA6NDI0 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
TRIM49BA6NDI0 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
TRIM49BA6NDI0 AL356740.2-201ENST00000601559 647 ntBASIC24.14■■□□□ 1.45
TRIM49BA6NDI0 AC099791.2-201ENST00000605725 427 ntBASIC24.14■■□□□ 1.45
TRIM49BA6NDI0 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
TRIM49BA6NDI0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC24.14■■□□□ 1.45
TRIM49BA6NDI0 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC24.14■■□□□ 1.45
TRIM49BA6NDI0 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC24.14■■□□□ 1.45
TRIM49BA6NDI0 AC007375.3-201ENST00000600936 2314 ntBASIC24.13■■□□□ 1.45
TRIM49BA6NDI0 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TRIM49BA6NDI0 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TRIM49BA6NDI0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
TRIM49BA6NDI0 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TRIM49BA6NDI0 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TRIM49BA6NDI0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
TRIM49BA6NDI0 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TRIM49BA6NDI0 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
TRIM49BA6NDI0 pRNA.6-201ENST00000610482 90 ntBASIC24.12■■□□□ 1.45
TRIM49BA6NDI0 pRNA.5-201ENST00000612139 90 ntBASIC24.12■■□□□ 1.45
TRIM49BA6NDI0 pRNA.11-201ENST00000618423 90 ntBASIC24.12■■□□□ 1.45
TRIM49BA6NDI0 pRNA.13-201ENST00000619112 90 ntBASIC24.12■■□□□ 1.45
TRIM49BA6NDI0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TRIM49BA6NDI0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC24.11■■□□□ 1.45
TRIM49BA6NDI0 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TRIM49BA6NDI0 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
TRIM49BA6NDI0 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC24.11■■□□□ 1.45
TRIM49BA6NDI0 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC24.11■■□□□ 1.45
TRIM49BA6NDI0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.11■■□□□ 1.45
TRIM49BA6NDI0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC24.11■■□□□ 1.45
TRIM49BA6NDI0 AL512631.2-201ENST00000604634 923 ntBASIC24.11■■□□□ 1.45
TRIM49BA6NDI0 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC24.11■■□□□ 1.45
TRIM49BA6NDI0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
TRIM49BA6NDI0 AC241377.3-202ENST00000626088 1088 ntBASIC24.11■■□□□ 1.45
TRIM49BA6NDI0 AC241585.3-202ENST00000628937 1088 ntBASIC24.11■■□□□ 1.45
TRIM49BA6NDI0 AC245100.8-202ENST00000629247 1058 ntBASIC24.11■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms