Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC32.71■■■□□ 2.83
HFM1A2PYH4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
HFM1A2PYH4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC32.71■■■□□ 2.83
HFM1A2PYH4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC32.71■■■□□ 2.83
HFM1A2PYH4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
HFM1A2PYH4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC32.71■■■□□ 2.83
HFM1A2PYH4 AC087239.1-201ENST00000622671 572 ntBASIC32.71■■■□□ 2.83
HFM1A2PYH4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
HFM1A2PYH4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
HFM1A2PYH4 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
HFM1A2PYH4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
HFM1A2PYH4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
HFM1A2PYH4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC32.7■■■□□ 2.83
HFM1A2PYH4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
HFM1A2PYH4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC32.7■■■□□ 2.83
HFM1A2PYH4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC32.7■■■□□ 2.83
HFM1A2PYH4 TPRG1LP1-201ENST00000598702 760 ntBASIC32.7■■■□□ 2.83
HFM1A2PYH4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC32.7■■■□□ 2.83
HFM1A2PYH4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
HFM1A2PYH4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC32.69■■■□□ 2.82
HFM1A2PYH4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
HFM1A2PYH4 SMUG1P1-201ENST00000590640 811 ntBASIC32.69■■■□□ 2.82
HFM1A2PYH4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC32.69■■■□□ 2.82
HFM1A2PYH4 AC105233.4-201ENST00000642045 216 ntBASIC32.69■■■□□ 2.82
HFM1A2PYH4 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC32.69■■■□□ 2.82
HFM1A2PYH4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
HFM1A2PYH4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC32.69■■■□□ 2.82
HFM1A2PYH4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
HFM1A2PYH4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
HFM1A2PYH4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC32.69■■■□□ 2.82
HFM1A2PYH4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC32.69■■■□□ 2.82
HFM1A2PYH4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC32.69■■■□□ 2.82
HFM1A2PYH4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC32.68■■■□□ 2.82
HFM1A2PYH4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC32.68■■■□□ 2.82
HFM1A2PYH4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
HFM1A2PYH4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC32.68■■■□□ 2.82
HFM1A2PYH4 AC123595.1-201ENST00000440769 1046 ntBASIC32.68■■■□□ 2.82
HFM1A2PYH4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC32.68■■■□□ 2.82
HFM1A2PYH4 OXCT2P1-201ENST00000447263 1535 ntBASIC32.68■■■□□ 2.82
HFM1A2PYH4 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC32.67■■■□□ 2.82
HFM1A2PYH4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC32.67■■■□□ 2.82
HFM1A2PYH4 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC32.67■■■□□ 2.82
HFM1A2PYH4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC32.67■■■□□ 2.82
HFM1A2PYH4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC32.67■■■□□ 2.82
HFM1A2PYH4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC32.67■■■□□ 2.82
HFM1A2PYH4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
HFM1A2PYH4 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC32.67■■■□□ 2.82
HFM1A2PYH4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC32.66■■■□□ 2.82
HFM1A2PYH4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
HFM1A2PYH4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC32.66■■■□□ 2.82
HFM1A2PYH4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC32.66■■■□□ 2.82
HFM1A2PYH4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC32.66■■■□□ 2.82
HFM1A2PYH4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC32.66■■■□□ 2.82
HFM1A2PYH4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC32.66■■■□□ 2.82
HFM1A2PYH4 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
HFM1A2PYH4 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC32.66■■■□□ 2.82
HFM1A2PYH4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC32.66■■■□□ 2.82
HFM1A2PYH4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC32.65■■■□□ 2.82
HFM1A2PYH4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
HFM1A2PYH4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
HFM1A2PYH4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC32.65■■■□□ 2.82
HFM1A2PYH4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC32.65■■■□□ 2.82
HFM1A2PYH4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC32.65■■■□□ 2.82
HFM1A2PYH4 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC32.65■■■□□ 2.82
HFM1A2PYH4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
HFM1A2PYH4 ANKRD20A6P-201ENST00000618763 204 ntBASIC32.64■■■□□ 2.82
HFM1A2PYH4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC32.64■■■□□ 2.82
HFM1A2PYH4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC32.64■■■□□ 2.81
HFM1A2PYH4 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC32.63■■■□□ 2.81
HFM1A2PYH4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
HFM1A2PYH4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
HFM1A2PYH4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
HFM1A2PYH4 TERF1P2-201ENST00000583350 1212 ntBASIC32.63■■■□□ 2.81
HFM1A2PYH4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
HFM1A2PYH4 AC087742.1-201ENST00000575880 1738 ntBASIC32.62■■■□□ 2.81
HFM1A2PYH4 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC32.62■■■□□ 2.81
HFM1A2PYH4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC32.62■■■□□ 2.81
HFM1A2PYH4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC32.62■■■□□ 2.81
HFM1A2PYH4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
HFM1A2PYH4 DUX4L2-201ENST00000561772 1275 ntBASIC32.62■■■□□ 2.81
HFM1A2PYH4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC32.62■■■□□ 2.81
HFM1A2PYH4 DUX4L6-201ENST00000626483 1275 ntBASIC32.62■■■□□ 2.81
HFM1A2PYH4 DUX4L1-201ENST00000627662 1275 ntBASIC32.62■■■□□ 2.81
HFM1A2PYH4 DUX4L8-201ENST00000629013 1275 ntBASIC32.62■■■□□ 2.81
HFM1A2PYH4 DUX4L3-201ENST00000630187 1275 ntBASIC32.62■■■□□ 2.81
HFM1A2PYH4 DUX4L7-201ENST00000630678 1275 ntBASIC32.62■■■□□ 2.81
HFM1A2PYH4 DUX4L5-201ENST00000630834 1275 ntBASIC32.62■■■□□ 2.81
HFM1A2PYH4 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
HFM1A2PYH4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC32.61■■■□□ 2.81
HFM1A2PYH4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
HFM1A2PYH4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
HFM1A2PYH4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC32.6■■■□□ 2.81
HFM1A2PYH4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC32.6■■■□□ 2.81
HFM1A2PYH4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
HFM1A2PYH4 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC32.6■■■□□ 2.81
HFM1A2PYH4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
HFM1A2PYH4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
HFM1A2PYH4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC32.6■■■□□ 2.81
HFM1A2PYH4 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
HFM1A2PYH4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC32.59■■■□□ 2.81
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms