Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SMIM28A0A1B0GU29 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.63■■□□□ 1.37
SMIM28A0A1B0GU29 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.63■■□□□ 1.37
SMIM28A0A1B0GU29 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
SMIM28A0A1B0GU29 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SMIM28A0A1B0GU29 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SMIM28A0A1B0GU29 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
SMIM28A0A1B0GU29 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SMIM28A0A1B0GU29 HACD1-201ENST00000326961 773 ntTSL 2 BASIC23.62■■□□□ 1.37
SMIM28A0A1B0GU29 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SMIM28A0A1B0GU29 NT5C3AP1-201ENST00000394500 1012 ntBASIC23.62■■□□□ 1.37
SMIM28A0A1B0GU29 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SMIM28A0A1B0GU29 AC034268.1-201ENST00000441047 882 ntBASIC23.62■■□□□ 1.37
SMIM28A0A1B0GU29 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SMIM28A0A1B0GU29 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.62■■□□□ 1.37
SMIM28A0A1B0GU29 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC23.62■■□□□ 1.37
SMIM28A0A1B0GU29 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SMIM28A0A1B0GU29 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.62■■□□□ 1.37
SMIM28A0A1B0GU29 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
SMIM28A0A1B0GU29 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.62■■□□□ 1.37
SMIM28A0A1B0GU29 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SMIM28A0A1B0GU29 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.61■■□□□ 1.37
SMIM28A0A1B0GU29 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
SMIM28A0A1B0GU29 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
SMIM28A0A1B0GU29 OXCT2P1-201ENST00000447263 1535 ntBASIC23.61■■□□□ 1.37
SMIM28A0A1B0GU29 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
SMIM28A0A1B0GU29 AC092666.2-201ENST00000613287 246 ntBASIC23.61■■□□□ 1.37
SMIM28A0A1B0GU29 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.61■■□□□ 1.37
SMIM28A0A1B0GU29 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.61■■□□□ 1.37
SMIM28A0A1B0GU29 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
SMIM28A0A1B0GU29 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.6■■□□□ 1.37
SMIM28A0A1B0GU29 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.6■■□□□ 1.37
SMIM28A0A1B0GU29 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
SMIM28A0A1B0GU29 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SMIM28A0A1B0GU29 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SMIM28A0A1B0GU29 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SMIM28A0A1B0GU29 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC23.6■■□□□ 1.37
SMIM28A0A1B0GU29 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.6■■□□□ 1.37
SMIM28A0A1B0GU29 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.6■■□□□ 1.37
SMIM28A0A1B0GU29 DUX4L2-201ENST00000561772 1275 ntBASIC23.6■■□□□ 1.37
SMIM28A0A1B0GU29 AC104564.3-201ENST00000582367 638 ntBASIC23.6■■□□□ 1.37
SMIM28A0A1B0GU29 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.6■■□□□ 1.37
SMIM28A0A1B0GU29 DUX4L6-201ENST00000626483 1275 ntBASIC23.6■■□□□ 1.37
SMIM28A0A1B0GU29 DUX4L1-201ENST00000627662 1275 ntBASIC23.6■■□□□ 1.37
SMIM28A0A1B0GU29 DUX4L8-201ENST00000629013 1275 ntBASIC23.6■■□□□ 1.37
SMIM28A0A1B0GU29 DUX4L3-201ENST00000630187 1275 ntBASIC23.6■■□□□ 1.37
SMIM28A0A1B0GU29 DUX4L7-201ENST00000630678 1275 ntBASIC23.6■■□□□ 1.37
SMIM28A0A1B0GU29 DUX4L5-201ENST00000630834 1275 ntBASIC23.6■■□□□ 1.37
SMIM28A0A1B0GU29 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SMIM28A0A1B0GU29 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SMIM28A0A1B0GU29 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SMIM28A0A1B0GU29 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SMIM28A0A1B0GU29 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
SMIM28A0A1B0GU29 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SMIM28A0A1B0GU29 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SMIM28A0A1B0GU29 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
SMIM28A0A1B0GU29 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC23.59■■□□□ 1.37
SMIM28A0A1B0GU29 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.59■■□□□ 1.37
SMIM28A0A1B0GU29 SMUG1P1-201ENST00000590640 811 ntBASIC23.59■■□□□ 1.37
SMIM28A0A1B0GU29 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC23.59■■□□□ 1.37
SMIM28A0A1B0GU29 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SMIM28A0A1B0GU29 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SMIM28A0A1B0GU29 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SMIM28A0A1B0GU29 LINC02228-203ENST00000641970 1355 ntBASIC23.58■■□□□ 1.37
SMIM28A0A1B0GU29 CCDC92B-201ENST00000575506 885 ntBASIC23.58■■□□□ 1.37
SMIM28A0A1B0GU29 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.58■■□□□ 1.37
SMIM28A0A1B0GU29 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SMIM28A0A1B0GU29 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
SMIM28A0A1B0GU29 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.58■■□□□ 1.36
SMIM28A0A1B0GU29 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
SMIM28A0A1B0GU29 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SMIM28A0A1B0GU29 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
SMIM28A0A1B0GU29 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.57■■□□□ 1.36
SMIM28A0A1B0GU29 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
SMIM28A0A1B0GU29 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SMIM28A0A1B0GU29 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.57■■□□□ 1.36
SMIM28A0A1B0GU29 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.57■■□□□ 1.36
SMIM28A0A1B0GU29 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SMIM28A0A1B0GU29 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SMIM28A0A1B0GU29 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SMIM28A0A1B0GU29 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.56■■□□□ 1.36
SMIM28A0A1B0GU29 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.56■■□□□ 1.36
SMIM28A0A1B0GU29 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SMIM28A0A1B0GU29 TERF1P2-201ENST00000583350 1212 ntBASIC23.56■■□□□ 1.36
SMIM28A0A1B0GU29 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC23.56■■□□□ 1.36
SMIM28A0A1B0GU29 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SMIM28A0A1B0GU29 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.56■■□□□ 1.36
SMIM28A0A1B0GU29 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SMIM28A0A1B0GU29 LINC01960-201ENST00000563759 1884 ntBASIC23.56■■□□□ 1.36
SMIM28A0A1B0GU29 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SMIM28A0A1B0GU29 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SMIM28A0A1B0GU29 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SMIM28A0A1B0GU29 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SMIM28A0A1B0GU29 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SMIM28A0A1B0GU29 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SMIM28A0A1B0GU29 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.55■■□□□ 1.36
SMIM28A0A1B0GU29 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
SMIM28A0A1B0GU29 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
SMIM28A0A1B0GU29 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SMIM28A0A1B0GU29 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms