Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 AL031432.3-201ENST00000607698 485 ntBASIC21.69■■□□□ 1.06
TRBV5-4A0A0C4DH59 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRBV5-4A0A0C4DH59 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRBV5-4A0A0C4DH59 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRBV5-4A0A0C4DH59 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
TRBV5-4A0A0C4DH59 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRBV5-4A0A0C4DH59 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRBV5-4A0A0C4DH59 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.68■■□□□ 1.06
TRBV5-4A0A0C4DH59 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.68■■□□□ 1.06
TRBV5-4A0A0C4DH59 AP005435.1-201ENST00000529293 1178 ntBASIC21.68■■□□□ 1.06
TRBV5-4A0A0C4DH59 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
TRBV5-4A0A0C4DH59 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.68■■□□□ 1.06
TRBV5-4A0A0C4DH59 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.68■■□□□ 1.06
TRBV5-4A0A0C4DH59 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
TRBV5-4A0A0C4DH59 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
TRBV5-4A0A0C4DH59 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRBV5-4A0A0C4DH59 AC137767.1-201ENST00000602918 1920 ntBASIC21.68■■□□□ 1.06
TRBV5-4A0A0C4DH59 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRBV5-4A0A0C4DH59 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
TRBV5-4A0A0C4DH59 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.67■■□□□ 1.06
TRBV5-4A0A0C4DH59 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.67■■□□□ 1.06
TRBV5-4A0A0C4DH59 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRBV5-4A0A0C4DH59 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRBV5-4A0A0C4DH59 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRBV5-4A0A0C4DH59 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
TRBV5-4A0A0C4DH59 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
TRBV5-4A0A0C4DH59 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.67■■□□□ 1.06
TRBV5-4A0A0C4DH59 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.67■■□□□ 1.06
TRBV5-4A0A0C4DH59 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRBV5-4A0A0C4DH59 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRBV5-4A0A0C4DH59 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRBV5-4A0A0C4DH59 AC233992.3-201ENST00000607491 485 ntBASIC21.67■■□□□ 1.06
TRBV5-4A0A0C4DH59 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRBV5-4A0A0C4DH59 GUSBP5-202ENST00000510805 1989 ntBASIC21.67■■□□□ 1.06
TRBV5-4A0A0C4DH59 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRBV5-4A0A0C4DH59 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRBV5-4A0A0C4DH59 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRBV5-4A0A0C4DH59 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
TRBV5-4A0A0C4DH59 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRBV5-4A0A0C4DH59 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
TRBV5-4A0A0C4DH59 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.66■■□□□ 1.06
TRBV5-4A0A0C4DH59 AP001330.3-201ENST00000520123 633 ntBASIC21.66■■□□□ 1.06
TRBV5-4A0A0C4DH59 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRBV5-4A0A0C4DH59 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRBV5-4A0A0C4DH59 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRBV5-4A0A0C4DH59 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRBV5-4A0A0C4DH59 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRBV5-4A0A0C4DH59 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRBV5-4A0A0C4DH59 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRBV5-4A0A0C4DH59 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRBV5-4A0A0C4DH59 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRBV5-4A0A0C4DH59 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRBV5-4A0A0C4DH59 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRBV5-4A0A0C4DH59 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRBV5-4A0A0C4DH59 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.65■■□□□ 1.06
TRBV5-4A0A0C4DH59 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
TRBV5-4A0A0C4DH59 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.65■■□□□ 1.06
TRBV5-4A0A0C4DH59 AL355001.2-201ENST00000620617 1191 ntBASIC21.65■■□□□ 1.06
TRBV5-4A0A0C4DH59 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRBV5-4A0A0C4DH59 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRBV5-4A0A0C4DH59 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRBV5-4A0A0C4DH59 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.65■■□□□ 1.06
TRBV5-4A0A0C4DH59 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRBV5-4A0A0C4DH59 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRBV5-4A0A0C4DH59 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.65■■□□□ 1.06
TRBV5-4A0A0C4DH59 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRBV5-4A0A0C4DH59 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.64■■□□□ 1.06
TRBV5-4A0A0C4DH59 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
TRBV5-4A0A0C4DH59 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRBV5-4A0A0C4DH59 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.64■■□□□ 1.05
TRBV5-4A0A0C4DH59 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRBV5-4A0A0C4DH59 AC080038.3-201ENST00000623346 1952 ntBASIC21.64■■□□□ 1.05
TRBV5-4A0A0C4DH59 AL117328.2-201ENST00000624617 1940 ntBASIC21.64■■□□□ 1.05
TRBV5-4A0A0C4DH59 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRBV5-4A0A0C4DH59 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRBV5-4A0A0C4DH59 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRBV5-4A0A0C4DH59 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
TRBV5-4A0A0C4DH59 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.63■■□□□ 1.05
TRBV5-4A0A0C4DH59 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.63■■□□□ 1.05
TRBV5-4A0A0C4DH59 AC010141.3-201ENST00000456659 717 ntBASIC21.63■■□□□ 1.05
TRBV5-4A0A0C4DH59 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.63■■□□□ 1.05
TRBV5-4A0A0C4DH59 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRBV5-4A0A0C4DH59 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.63■■□□□ 1.05
TRBV5-4A0A0C4DH59 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
TRBV5-4A0A0C4DH59 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRBV5-4A0A0C4DH59 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRBV5-4A0A0C4DH59 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRBV5-4A0A0C4DH59 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TRBV5-4A0A0C4DH59 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TRBV5-4A0A0C4DH59 AC242852.2-201ENST00000615738 1807 ntBASIC21.62■■□□□ 1.05
TRBV5-4A0A0C4DH59 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TRBV5-4A0A0C4DH59 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRBV5-4A0A0C4DH59 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRBV5-4A0A0C4DH59 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.62■■□□□ 1.05
TRBV5-4A0A0C4DH59 MIR939-201ENST00000401314 82 ntBASIC21.62■■□□□ 1.05
TRBV5-4A0A0C4DH59 SUDS3P1-201ENST00000505831 966 ntBASIC21.62■■□□□ 1.05
TRBV5-4A0A0C4DH59 AC027682.1-201ENST00000562846 899 ntBASIC21.62■■□□□ 1.05
TRBV5-4A0A0C4DH59 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.62■■□□□ 1.05
TRBV5-4A0A0C4DH59 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.62■■□□□ 1.05
TRBV5-4A0A0C4DH59 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms