Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC28.28■■■□□ 2.12
LOC102724428A0A0B4J2F2 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
LOC102724428A0A0B4J2F2 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
LOC102724428A0A0B4J2F2 MED17-227ENST00000640521 2047 ntTSL 5 BASIC28.28■■■□□ 2.12
LOC102724428A0A0B4J2F2 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
LOC102724428A0A0B4J2F2 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
LOC102724428A0A0B4J2F2 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
LOC102724428A0A0B4J2F2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC28.27■■■□□ 2.12
LOC102724428A0A0B4J2F2 AC142086.2-201ENST00000569753 217 ntBASIC28.27■■■□□ 2.12
LOC102724428A0A0B4J2F2 AC142381.3-201ENST00000568208 1670 ntBASIC28.26■■■□□ 2.12
LOC102724428A0A0B4J2F2 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
LOC102724428A0A0B4J2F2 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
LOC102724428A0A0B4J2F2 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC28.26■■■□□ 2.11
LOC102724428A0A0B4J2F2 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC28.26■■■□□ 2.11
LOC102724428A0A0B4J2F2 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC28.26■■■□□ 2.11
LOC102724428A0A0B4J2F2 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
LOC102724428A0A0B4J2F2 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
LOC102724428A0A0B4J2F2 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
LOC102724428A0A0B4J2F2 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC28.25■■■□□ 2.11
LOC102724428A0A0B4J2F2 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC28.25■■■□□ 2.11
LOC102724428A0A0B4J2F2 CD99P1-205ENST00000527459 561 ntBASIC28.25■■■□□ 2.11
LOC102724428A0A0B4J2F2 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC28.25■■■□□ 2.11
LOC102724428A0A0B4J2F2 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
LOC102724428A0A0B4J2F2 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
LOC102724428A0A0B4J2F2 AL050303.2-201ENST00000619798 666 ntBASIC28.25■■■□□ 2.11
LOC102724428A0A0B4J2F2 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
LOC102724428A0A0B4J2F2 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC28.25■■■□□ 2.11
LOC102724428A0A0B4J2F2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC28.25■■■□□ 2.11
LOC102724428A0A0B4J2F2 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
LOC102724428A0A0B4J2F2 OXCT2P1-201ENST00000447263 1535 ntBASIC28.24■■■□□ 2.11
LOC102724428A0A0B4J2F2 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
LOC102724428A0A0B4J2F2 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
LOC102724428A0A0B4J2F2 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC28.23■■■□□ 2.11
LOC102724428A0A0B4J2F2 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC28.23■■■□□ 2.11
LOC102724428A0A0B4J2F2 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
LOC102724428A0A0B4J2F2 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
LOC102724428A0A0B4J2F2 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC28.23■■■□□ 2.11
LOC102724428A0A0B4J2F2 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
LOC102724428A0A0B4J2F2 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC28.23■■■□□ 2.11
LOC102724428A0A0B4J2F2 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
LOC102724428A0A0B4J2F2 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC28.23■■■□□ 2.11
LOC102724428A0A0B4J2F2 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
LOC102724428A0A0B4J2F2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
LOC102724428A0A0B4J2F2 EED-207ENST00000528180 1745 ntTSL 5 BASIC28.23■■■□□ 2.11
LOC102724428A0A0B4J2F2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
LOC102724428A0A0B4J2F2 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC28.22■■■□□ 2.11
LOC102724428A0A0B4J2F2 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC28.22■■■□□ 2.11
LOC102724428A0A0B4J2F2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC28.22■■■□□ 2.11
LOC102724428A0A0B4J2F2 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC28.22■■■□□ 2.11
LOC102724428A0A0B4J2F2 APTR-205ENST00000447009 902 ntTSL 2 BASIC28.22■■■□□ 2.11
LOC102724428A0A0B4J2F2 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC28.22■■■□□ 2.11
LOC102724428A0A0B4J2F2 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC28.22■■■□□ 2.11
LOC102724428A0A0B4J2F2 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC28.21■■■□□ 2.11
LOC102724428A0A0B4J2F2 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC28.21■■■□□ 2.11
LOC102724428A0A0B4J2F2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC28.21■■■□□ 2.11
LOC102724428A0A0B4J2F2 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
LOC102724428A0A0B4J2F2 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
LOC102724428A0A0B4J2F2 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
LOC102724428A0A0B4J2F2 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.1
LOC102724428A0A0B4J2F2 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC28.2■■■□□ 2.1
LOC102724428A0A0B4J2F2 MAZ-216ENST00000616501 991 ntTSL 5 BASIC28.2■■■□□ 2.1
LOC102724428A0A0B4J2F2 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
LOC102724428A0A0B4J2F2 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
LOC102724428A0A0B4J2F2 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC28.2■■■□□ 2.1
LOC102724428A0A0B4J2F2 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
LOC102724428A0A0B4J2F2 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC28.19■■■□□ 2.1
LOC102724428A0A0B4J2F2 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC28.19■■■□□ 2.1
LOC102724428A0A0B4J2F2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC28.19■■■□□ 2.1
LOC102724428A0A0B4J2F2 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC28.19■■■□□ 2.1
LOC102724428A0A0B4J2F2 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC28.19■■■□□ 2.1
LOC102724428A0A0B4J2F2 AL121832.2-201ENST00000610979 668 ntBASIC28.19■■■□□ 2.1
LOC102724428A0A0B4J2F2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC28.19■■■□□ 2.1
LOC102724428A0A0B4J2F2 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
LOC102724428A0A0B4J2F2 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
LOC102724428A0A0B4J2F2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
LOC102724428A0A0B4J2F2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
LOC102724428A0A0B4J2F2 AL353803.4-201ENST00000565882 1934 ntBASIC28.18■■■□□ 2.1
LOC102724428A0A0B4J2F2 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
LOC102724428A0A0B4J2F2 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
LOC102724428A0A0B4J2F2 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
LOC102724428A0A0B4J2F2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC28.18■■■□□ 2.1
LOC102724428A0A0B4J2F2 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
LOC102724428A0A0B4J2F2 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
LOC102724428A0A0B4J2F2 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
LOC102724428A0A0B4J2F2 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
LOC102724428A0A0B4J2F2 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC28.18■■■□□ 2.1
LOC102724428A0A0B4J2F2 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
LOC102724428A0A0B4J2F2 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
LOC102724428A0A0B4J2F2 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
LOC102724428A0A0B4J2F2 TSPY6P-201ENST00000448518 926 ntBASIC28.17■■■□□ 2.1
LOC102724428A0A0B4J2F2 TSPY20P-201ENST00000450910 630 ntBASIC28.17■■■□□ 2.1
LOC102724428A0A0B4J2F2 AC083906.2-201ENST00000511578 360 ntBASIC28.17■■■□□ 2.1
LOC102724428A0A0B4J2F2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC28.17■■■□□ 2.1
LOC102724428A0A0B4J2F2 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC28.17■■■□□ 2.1
LOC102724428A0A0B4J2F2 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
LOC102724428A0A0B4J2F2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC28.17■■■□□ 2.1
LOC102724428A0A0B4J2F2 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
LOC102724428A0A0B4J2F2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
LOC102724428A0A0B4J2F2 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
LOC102724428A0A0B4J2F2 GUSBP6-202ENST00000438529 1198 ntBASIC28.16■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms