Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV25A0A0B4J276 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
TRAV25A0A0B4J276 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TRAV25A0A0B4J276 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV25A0A0B4J276 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV25A0A0B4J276 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV25A0A0B4J276 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
TRAV25A0A0B4J276 LINC01960-201ENST00000563759 1884 ntBASIC16.44■□□□□ 0.22
TRAV25A0A0B4J276 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV25A0A0B4J276 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV25A0A0B4J276 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV25A0A0B4J276 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV25A0A0B4J276 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TRAV25A0A0B4J276 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAV25A0A0B4J276 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV25A0A0B4J276 TSPY26P-201ENST00000476365 1326 ntBASIC16.44■□□□□ 0.22
TRAV25A0A0B4J276 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV25A0A0B4J276 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV25A0A0B4J276 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV25A0A0B4J276 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAV25A0A0B4J276 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV25A0A0B4J276 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAV25A0A0B4J276 IRS3P-201ENST00000223076 1006 ntBASIC16.43■□□□□ 0.22
TRAV25A0A0B4J276 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TRAV25A0A0B4J276 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.43■□□□□ 0.22
TRAV25A0A0B4J276 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC16.43■□□□□ 0.22
TRAV25A0A0B4J276 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV25A0A0B4J276 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC16.43■□□□□ 0.22
TRAV25A0A0B4J276 ESRRAP2-201ENST00000418437 1549 ntBASIC16.43■□□□□ 0.22
TRAV25A0A0B4J276 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV25A0A0B4J276 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV25A0A0B4J276 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV25A0A0B4J276 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV25A0A0B4J276 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV25A0A0B4J276 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV25A0A0B4J276 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TRAV25A0A0B4J276 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV25A0A0B4J276 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV25A0A0B4J276 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
TRAV25A0A0B4J276 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV25A0A0B4J276 OXCT2P1-201ENST00000447263 1535 ntBASIC16.42■□□□□ 0.22
TRAV25A0A0B4J276 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV25A0A0B4J276 MIR572-201ENST00000384983 95 ntBASIC16.42■□□□□ 0.22
TRAV25A0A0B4J276 LHPP-203ENST00000392757 840 ntTSL 3 BASIC16.42■□□□□ 0.22
TRAV25A0A0B4J276 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV25A0A0B4J276 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAV25A0A0B4J276 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV25A0A0B4J276 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAV25A0A0B4J276 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV25A0A0B4J276 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV25A0A0B4J276 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV25A0A0B4J276 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV25A0A0B4J276 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV25A0A0B4J276 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
TRAV25A0A0B4J276 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV25A0A0B4J276 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV25A0A0B4J276 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAV25A0A0B4J276 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
TRAV25A0A0B4J276 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV25A0A0B4J276 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TRAV25A0A0B4J276 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAV25A0A0B4J276 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAV25A0A0B4J276 PKM-204ENST00000449901 2526 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAV25A0A0B4J276 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV25A0A0B4J276 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV25A0A0B4J276 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAV25A0A0B4J276 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC16.41■□□□□ 0.22
TRAV25A0A0B4J276 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAV25A0A0B4J276 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAV25A0A0B4J276 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV25A0A0B4J276 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV25A0A0B4J276 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAV25A0A0B4J276 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV25A0A0B4J276 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAV25A0A0B4J276 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV25A0A0B4J276 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV25A0A0B4J276 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV25A0A0B4J276 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV25A0A0B4J276 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV25A0A0B4J276 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAV25A0A0B4J276 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAV25A0A0B4J276 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV25A0A0B4J276 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
TRAV25A0A0B4J276 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV25A0A0B4J276 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV25A0A0B4J276 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
TRAV25A0A0B4J276 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV25A0A0B4J276 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRAV25A0A0B4J276 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV25A0A0B4J276 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV25A0A0B4J276 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV25A0A0B4J276 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TRAV25A0A0B4J276 RHOF-204ENST00000537265 699 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV25A0A0B4J276 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC16.39■□□□□ 0.21
TRAV25A0A0B4J276 AL358852.1-201ENST00000623174 1268 ntBASIC16.39■□□□□ 0.21
TRAV25A0A0B4J276 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV25A0A0B4J276 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV25A0A0B4J276 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TRAV25A0A0B4J276 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAV25A0A0B4J276 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms