Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AC007389.3-201ENST00000420724 1656 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
RAB40CQ96S21 AL157791.1-201ENST00000553667 1699 ntBASIC10.59□□□□□ -0.71
RAB40CQ96S21 PPP3CB-204ENST00000394829 3149 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
RAB40CQ96S21 TMEM63B-201ENST00000259746 3318 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
RAB40CQ96S21 PM20D1-201ENST00000367136 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
RAB40CQ96S21 TIAM1-206ENST00000541036 7018 ntTSL 5 BASIC10.59□□□□□ -0.71
RAB40CQ96S21 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
RAB40CQ96S21 CMTR2-202ENST00000434935 4104 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
RAB40CQ96S21 RNF13-201ENST00000344229 2866 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
RAB40CQ96S21 SNRK-202ENST00000429705 5128 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
RAB40CQ96S21 KCND3-203ENST00000369697 7396 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
RAB40CQ96S21 SIGLEC11-203ENST00000447370 3173 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
RAB40CQ96S21 PLK4-203ENST00000507249 3195 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
RAB40CQ96S21 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC10.58□□□□□ -0.72
RAB40CQ96S21 PNPLA6-203ENST00000450331 4457 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RAB40CQ96S21 WIPF1-204ENST00000392547 4587 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
RAB40CQ96S21 PEX11B-203ENST00000537888 1632 ntTSL 2 BASIC10.58□□□□□ -0.72
RAB40CQ96S21 ZDHHC4-202ENST00000396706 1942 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
RAB40CQ96S21 TRAF3IP3-203ENST00000367025 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RAB40CQ96S21 PTGR2-204ENST00000555228 2543 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
RAB40CQ96S21 DNAJC9-201ENST00000372950 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RAB40CQ96S21 CNTNAP2-201ENST00000361727 9896 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RAB40CQ96S21 ACBD5-205ENST00000396271 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
RAB40CQ96S21 CDC14A-201ENST00000336454 4137 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RAB40CQ96S21 ERI1-201ENST00000250263 4615 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RAB40CQ96S21 ARHGEF11-201ENST00000361409 5788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
RAB40CQ96S21 RNF4-222ENST00000541204 2796 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RAB40CQ96S21 POLL-201ENST00000299206 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RAB40CQ96S21 TTC26-207ENST00000478836 1794 ntTSL 2 BASIC10.58□□□□□ -0.72
RAB40CQ96S21 KIR2DL4-205ENST00000396284 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
RAB40CQ96S21 GLDN-210ENST00000612989 1676 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RAB40CQ96S21 WASL-201ENST00000223023 4435 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RAB40CQ96S21 PPP1R32-203ENST00000432063 1472 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RAB40CQ96S21 ASGR2-201ENST00000254850 1396 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
RAB40CQ96S21 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RAB40CQ96S21 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC10.58□□□□□ -0.72
RAB40CQ96S21 MYL7-201ENST00000223364 612 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RAB40CQ96S21 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RAB40CQ96S21 PRDX1-202ENST00000319248 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RAB40CQ96S21 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RAB40CQ96S21 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RAB40CQ96S21 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC10.58□□□□□ -0.72
RAB40CQ96S21 AC016700.1-201ENST00000429424 312 ntBASIC10.58□□□□□ -0.72
RAB40CQ96S21 AL357140.1-201ENST00000454104 424 ntTSL 2 BASIC10.58□□□□□ -0.72
RAB40CQ96S21 PFN2-206ENST00000461930 606 ntTSL 4 BASIC10.58□□□□□ -0.72
RAB40CQ96S21 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC10.58□□□□□ -0.72
RAB40CQ96S21 AC093300.1-201ENST00000510368 1201 ntBASIC10.58□□□□□ -0.72
RAB40CQ96S21 SLC25A51P3-201ENST00000521814 889 ntBASIC10.58□□□□□ -0.72
RAB40CQ96S21 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC10.58□□□□□ -0.72
RAB40CQ96S21 PHBP15-201ENST00000574228 665 ntBASIC10.58□□□□□ -0.72
RAB40CQ96S21 AC079336.3-201ENST00000577227 475 ntTSL 3 BASIC10.58□□□□□ -0.72
RAB40CQ96S21 KC6-205ENST00000599934 556 ntTSL 4 BASIC10.58□□□□□ -0.72
RAB40CQ96S21 AC010326.4-202ENST00000603829 541 ntBASIC10.58□□□□□ -0.72
RAB40CQ96S21 AC010326.4-201ENST00000604665 891 ntBASIC10.58□□□□□ -0.72
RAB40CQ96S21 AL359091.4-201ENST00000610052 409 ntBASIC10.58□□□□□ -0.72
RAB40CQ96S21 MFSD12-215ENST00000615613 688 ntBASIC10.58□□□□□ -0.72
RAB40CQ96S21 MIR6799-201ENST00000620297 69 ntBASIC10.58□□□□□ -0.72
RAB40CQ96S21 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC10.58□□□□□ -0.72
RAB40CQ96S21 ILF3-219ENST00000590261 3219 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
RAB40CQ96S21 AC112176.1-201ENST00000565428 3024 ntBASIC10.58□□□□□ -0.72
RAB40CQ96S21 KLK2-202ENST00000358049 2847 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RAB40CQ96S21 VAV1-202ENST00000539284 2627 ntTSL 5 BASIC10.58□□□□□ -0.72
RAB40CQ96S21 MSANTD4-201ENST00000301919 4087 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RAB40CQ96S21 RUBCNL-208ENST00000429979 3979 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
RAB40CQ96S21 AC006037.2-201ENST00000622975 2232 ntBASIC10.58□□□□□ -0.72
RAB40CQ96S21 RBMY2FP-201ENST00000303922 2042 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RAB40CQ96S21 LRSAM1-202ENST00000323301 3376 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
RAB40CQ96S21 DR1-202ENST00000370272 10148 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RAB40CQ96S21 CCT8-211ENST00000540844 1927 ntTSL 2 BASIC10.58□□□□□ -0.72
RAB40CQ96S21 SPG11-201ENST00000261866 7774 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
RAB40CQ96S21 ATAT1-204ENST00000330083 1728 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RAB40CQ96S21 NAMA-207ENST00000605707 1748 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RAB40CQ96S21 ALDH1L1-202ENST00000393431 2797 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RAB40CQ96S21 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
RAB40CQ96S21 GPALPP1-202ENST00000361121 3410 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
RAB40CQ96S21 ALX1-201ENST00000316824 1445 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RAB40CQ96S21 CTBP2P8-201ENST00000422584 1330 ntBASIC10.58□□□□□ -0.72
RAB40CQ96S21 SCN3B-206ENST00000530277 3984 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RAB40CQ96S21 AL109976.1-201ENST00000621919 5678 ntBASIC10.58□□□□□ -0.72
RAB40CQ96S21 GDPD2-205ENST00000538649 2067 ntTSL 2 BASIC10.57□□□□□ -0.72
RAB40CQ96S21 PIGM-201ENST00000368090 4319 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
RAB40CQ96S21 SRC-203ENST00000373567 4321 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RAB40CQ96S21 XRRA1-201ENST00000321448 4695 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
RAB40CQ96S21 AL162591.1-201ENST00000424435 1756 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
RAB40CQ96S21 LIFR-AS1-201ENST00000500733 3803 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
RAB40CQ96S21 WDR37-201ENST00000263150 4462 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RAB40CQ96S21 BCDIN3D-AS1-201ENST00000548872 3078 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
RAB40CQ96S21 CDC42BPA-202ENST00000366764 10445 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
RAB40CQ96S21 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
RAB40CQ96S21 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
RAB40CQ96S21 SPRYD3-204ENST00000547837 1655 ntTSL 5 BASIC10.57□□□□□ -0.72
RAB40CQ96S21 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
RAB40CQ96S21 SNHG14-218ENST00000553108 2208 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
RAB40CQ96S21 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
RAB40CQ96S21 BAHCC1-206ENST00000584436 10801 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
RAB40CQ96S21 SLA2-201ENST00000262866 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RAB40CQ96S21 CLINT1-206ENST00000523094 3987 ntTSL 2 BASIC10.57□□□□□ -0.72
RAB40CQ96S21 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RAB40CQ96S21 FAM102A-203ENST00000373095 4144 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
RAB40CQ96S21 ANKZF1-203ENST00000410034 2486 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms