Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.57■■□□□ 1.04
DNMT3AQ9Y6K1 IGHV3-19-201ENST00000521488 291 ntBASIC21.57■■□□□ 1.04
DNMT3AQ9Y6K1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
DNMT3AQ9Y6K1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
DNMT3AQ9Y6K1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
DNMT3AQ9Y6K1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
DNMT3AQ9Y6K1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
DNMT3AQ9Y6K1 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
DNMT3AQ9Y6K1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
DNMT3AQ9Y6K1 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.57■■□□□ 1.04
DNMT3AQ9Y6K1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DNMT3AQ9Y6K1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.56■■□□□ 1.04
DNMT3AQ9Y6K1 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
DNMT3AQ9Y6K1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DNMT3AQ9Y6K1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DNMT3AQ9Y6K1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
DNMT3AQ9Y6K1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.56■■□□□ 1.04
DNMT3AQ9Y6K1 AC087239.1-201ENST00000622671 572 ntBASIC21.56■■□□□ 1.04
DNMT3AQ9Y6K1 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
DNMT3AQ9Y6K1 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
DNMT3AQ9Y6K1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.55■■□□□ 1.04
DNMT3AQ9Y6K1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
DNMT3AQ9Y6K1 AC105265.2-201ENST00000467189 838 ntBASIC21.55■■□□□ 1.04
DNMT3AQ9Y6K1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
DNMT3AQ9Y6K1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
DNMT3AQ9Y6K1 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DNMT3AQ9Y6K1 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DNMT3AQ9Y6K1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
DNMT3AQ9Y6K1 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.55■■□□□ 1.04
DNMT3AQ9Y6K1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
DNMT3AQ9Y6K1 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.54■■□□□ 1.04
DNMT3AQ9Y6K1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.54■■□□□ 1.04
DNMT3AQ9Y6K1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.54■■□□□ 1.04
DNMT3AQ9Y6K1 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
DNMT3AQ9Y6K1 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
DNMT3AQ9Y6K1 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
DNMT3AQ9Y6K1 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
DNMT3AQ9Y6K1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.53■■□□□ 1.04
DNMT3AQ9Y6K1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
DNMT3AQ9Y6K1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.53■■□□□ 1.04
DNMT3AQ9Y6K1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.53■■□□□ 1.04
DNMT3AQ9Y6K1 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
DNMT3AQ9Y6K1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
DNMT3AQ9Y6K1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
DNMT3AQ9Y6K1 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DNMT3AQ9Y6K1 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
DNMT3AQ9Y6K1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.52■■□□□ 1.04
DNMT3AQ9Y6K1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
DNMT3AQ9Y6K1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.52■■□□□ 1.04
DNMT3AQ9Y6K1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.52■■□□□ 1.04
DNMT3AQ9Y6K1 AC010141.3-201ENST00000456659 717 ntBASIC21.52■■□□□ 1.04
DNMT3AQ9Y6K1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DNMT3AQ9Y6K1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DNMT3AQ9Y6K1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
DNMT3AQ9Y6K1 TSPY26P-201ENST00000476365 1326 ntBASIC21.52■■□□□ 1.03
DNMT3AQ9Y6K1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
DNMT3AQ9Y6K1 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
DNMT3AQ9Y6K1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
DNMT3AQ9Y6K1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DNMT3AQ9Y6K1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
DNMT3AQ9Y6K1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
DNMT3AQ9Y6K1 IRS3P-201ENST00000223076 1006 ntBASIC21.51■■□□□ 1.03
DNMT3AQ9Y6K1 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.51■■□□□ 1.03
DNMT3AQ9Y6K1 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DNMT3AQ9Y6K1 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
DNMT3AQ9Y6K1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DNMT3AQ9Y6K1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.51■■□□□ 1.03
DNMT3AQ9Y6K1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.51■■□□□ 1.03
DNMT3AQ9Y6K1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DNMT3AQ9Y6K1 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
DNMT3AQ9Y6K1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DNMT3AQ9Y6K1 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
DNMT3AQ9Y6K1 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
DNMT3AQ9Y6K1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DNMT3AQ9Y6K1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DNMT3AQ9Y6K1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
DNMT3AQ9Y6K1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
DNMT3AQ9Y6K1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
DNMT3AQ9Y6K1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.5■■□□□ 1.03
DNMT3AQ9Y6K1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
DNMT3AQ9Y6K1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DNMT3AQ9Y6K1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DNMT3AQ9Y6K1 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DNMT3AQ9Y6K1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.5■■□□□ 1.03
DNMT3AQ9Y6K1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.5■■□□□ 1.03
DNMT3AQ9Y6K1 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
DNMT3AQ9Y6K1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DNMT3AQ9Y6K1 MIR572-201ENST00000384983 95 ntBASIC21.49■■□□□ 1.03
DNMT3AQ9Y6K1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.49■■□□□ 1.03
DNMT3AQ9Y6K1 ZNRF2P3-201ENST00000424200 374 ntBASIC21.49■■□□□ 1.03
DNMT3AQ9Y6K1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.49■■□□□ 1.03
DNMT3AQ9Y6K1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.49■■□□□ 1.03
DNMT3AQ9Y6K1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.49■■□□□ 1.03
DNMT3AQ9Y6K1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.49■■□□□ 1.03
DNMT3AQ9Y6K1 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DNMT3AQ9Y6K1 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
DNMT3AQ9Y6K1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
DNMT3AQ9Y6K1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.48■■□□□ 1.03
DNMT3AQ9Y6K1 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.48■■□□□ 1.03
DNMT3AQ9Y6K1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms