Protein–RNA interactions for Protein: Q9Y6H5

SNCAIP, Synphilin-1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIPQ9Y6H5 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SNCAIPQ9Y6H5 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SNCAIPQ9Y6H5 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC25.84■■□□□ 1.73
SNCAIPQ9Y6H5 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SNCAIPQ9Y6H5 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SNCAIPQ9Y6H5 ABHD17AP1-201ENST00000358206 933 ntBASIC25.84■■□□□ 1.73
SNCAIPQ9Y6H5 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SNCAIPQ9Y6H5 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC25.84■■□□□ 1.73
SNCAIPQ9Y6H5 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SNCAIPQ9Y6H5 MED17-227ENST00000640521 2047 ntTSL 5 BASIC25.83■■□□□ 1.73
SNCAIPQ9Y6H5 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SNCAIPQ9Y6H5 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SNCAIPQ9Y6H5 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
SNCAIPQ9Y6H5 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC25.83■■□□□ 1.73
SNCAIPQ9Y6H5 AL355802.2-201ENST00000402069 882 ntBASIC25.83■■□□□ 1.73
SNCAIPQ9Y6H5 AL109923.1-201ENST00000618799 583 ntBASIC25.83■■□□□ 1.73
SNCAIPQ9Y6H5 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
SNCAIPQ9Y6H5 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SNCAIPQ9Y6H5 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
SNCAIPQ9Y6H5 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
SNCAIPQ9Y6H5 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC25.82■■□□□ 1.72
SNCAIPQ9Y6H5 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SNCAIPQ9Y6H5 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC25.82■■□□□ 1.72
SNCAIPQ9Y6H5 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SNCAIPQ9Y6H5 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SNCAIPQ9Y6H5 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SNCAIPQ9Y6H5 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SNCAIPQ9Y6H5 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC25.82■■□□□ 1.72
SNCAIPQ9Y6H5 NCF1B-203ENST00000435988 1254 ntBASIC25.82■■□□□ 1.72
SNCAIPQ9Y6H5 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC25.82■■□□□ 1.72
SNCAIPQ9Y6H5 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC25.82■■□□□ 1.72
SNCAIPQ9Y6H5 AC068587.7-201ENST00000641602 218 ntBASIC25.82■■□□□ 1.72
SNCAIPQ9Y6H5 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SNCAIPQ9Y6H5 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SNCAIPQ9Y6H5 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.81■■□□□ 1.72
SNCAIPQ9Y6H5 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC25.81■■□□□ 1.72
SNCAIPQ9Y6H5 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SNCAIPQ9Y6H5 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC25.81■■□□□ 1.72
SNCAIPQ9Y6H5 AC142381.3-201ENST00000568208 1670 ntBASIC25.81■■□□□ 1.72
SNCAIPQ9Y6H5 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SNCAIPQ9Y6H5 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SNCAIPQ9Y6H5 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
SNCAIPQ9Y6H5 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SNCAIPQ9Y6H5 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SNCAIPQ9Y6H5 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SNCAIPQ9Y6H5 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC25.81■■□□□ 1.72
SNCAIPQ9Y6H5 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SNCAIPQ9Y6H5 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
SNCAIPQ9Y6H5 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
SNCAIPQ9Y6H5 AC079630.1-202ENST00000618127 1840 ntBASIC25.8■■□□□ 1.72
SNCAIPQ9Y6H5 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SNCAIPQ9Y6H5 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
SNCAIPQ9Y6H5 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC25.8■■□□□ 1.72
SNCAIPQ9Y6H5 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC25.8■■□□□ 1.72
SNCAIPQ9Y6H5 AC011767.1-201ENST00000617410 1153 ntBASIC25.8■■□□□ 1.72
SNCAIPQ9Y6H5 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SNCAIPQ9Y6H5 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SNCAIPQ9Y6H5 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC25.79■■□□□ 1.72
SNCAIPQ9Y6H5 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC25.79■■□□□ 1.72
SNCAIPQ9Y6H5 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SNCAIPQ9Y6H5 MIR663A-201ENST00000385250 93 ntBASIC25.79■■□□□ 1.72
SNCAIPQ9Y6H5 AC010141.3-201ENST00000456659 717 ntBASIC25.79■■□□□ 1.72
SNCAIPQ9Y6H5 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC25.79■■□□□ 1.72
SNCAIPQ9Y6H5 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SNCAIPQ9Y6H5 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SNCAIPQ9Y6H5 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
SNCAIPQ9Y6H5 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC25.78■■□□□ 1.72
SNCAIPQ9Y6H5 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC25.78■■□□□ 1.72
SNCAIPQ9Y6H5 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC25.78■■□□□ 1.72
SNCAIPQ9Y6H5 METTL26-203ENST00000397664 604 ntTSL 2 BASIC25.78■■□□□ 1.72
SNCAIPQ9Y6H5 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC25.78■■□□□ 1.72
SNCAIPQ9Y6H5 SPI1-203ENST00000533030 661 ntTSL 2 BASIC25.78■■□□□ 1.72
SNCAIPQ9Y6H5 TESC-206ENST00000541210 936 ntTSL 3 BASIC25.78■■□□□ 1.72
SNCAIPQ9Y6H5 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC25.78■■□□□ 1.72
SNCAIPQ9Y6H5 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC25.78■■□□□ 1.72
SNCAIPQ9Y6H5 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
SNCAIPQ9Y6H5 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
SNCAIPQ9Y6H5 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SNCAIPQ9Y6H5 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SNCAIPQ9Y6H5 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SNCAIPQ9Y6H5 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
SNCAIPQ9Y6H5 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
SNCAIPQ9Y6H5 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC25.77■■□□□ 1.72
SNCAIPQ9Y6H5 CPT2-209ENST00000636935 803 ntTSL 5 BASIC25.77■■□□□ 1.72
SNCAIPQ9Y6H5 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
SNCAIPQ9Y6H5 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
SNCAIPQ9Y6H5 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SNCAIPQ9Y6H5 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC25.77■■□□□ 1.72
SNCAIPQ9Y6H5 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
SNCAIPQ9Y6H5 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SNCAIPQ9Y6H5 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC25.76■■□□□ 1.71
SNCAIPQ9Y6H5 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
SNCAIPQ9Y6H5 ESRRAP2-201ENST00000418437 1549 ntBASIC25.76■■□□□ 1.71
SNCAIPQ9Y6H5 EED-207ENST00000528180 1745 ntTSL 5 BASIC25.76■■□□□ 1.71
SNCAIPQ9Y6H5 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
SNCAIPQ9Y6H5 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.76■■□□□ 1.71
SNCAIPQ9Y6H5 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SNCAIPQ9Y6H5 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
SNCAIPQ9Y6H5 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.71
SNCAIPQ9Y6H5 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms