Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.97■■□□□ 1.11
PCDHB1Q9Y5F3 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.97■■□□□ 1.11
PCDHB1Q9Y5F3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHB1Q9Y5F3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHB1Q9Y5F3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.96■■□□□ 1.11
PCDHB1Q9Y5F3 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHB1Q9Y5F3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHB1Q9Y5F3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.96■■□□□ 1.11
PCDHB1Q9Y5F3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHB1Q9Y5F3 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.96■■□□□ 1.11
PCDHB1Q9Y5F3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHB1Q9Y5F3 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHB1Q9Y5F3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
PCDHB1Q9Y5F3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.96■■□□□ 1.11
PCDHB1Q9Y5F3 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.96■■□□□ 1.11
PCDHB1Q9Y5F3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHB1Q9Y5F3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.95■■□□□ 1.1
PCDHB1Q9Y5F3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.95■■□□□ 1.1
PCDHB1Q9Y5F3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.95■■□□□ 1.1
PCDHB1Q9Y5F3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.95■■□□□ 1.1
PCDHB1Q9Y5F3 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHB1Q9Y5F3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHB1Q9Y5F3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHB1Q9Y5F3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHB1Q9Y5F3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHB1Q9Y5F3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
PCDHB1Q9Y5F3 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDHB1Q9Y5F3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB1Q9Y5F3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
PCDHB1Q9Y5F3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB1Q9Y5F3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.94■■□□□ 1.1
PCDHB1Q9Y5F3 C1orf229-201ENST00000623686 2258 ntBASIC21.94■■□□□ 1.1
PCDHB1Q9Y5F3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB1Q9Y5F3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.94■■□□□ 1.1
PCDHB1Q9Y5F3 AL138724.1-201ENST00000606771 1088 ntBASIC21.94■■□□□ 1.1
PCDHB1Q9Y5F3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB1Q9Y5F3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
PCDHB1Q9Y5F3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
PCDHB1Q9Y5F3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.94■■□□□ 1.1
PCDHB1Q9Y5F3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
PCDHB1Q9Y5F3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHB1Q9Y5F3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHB1Q9Y5F3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHB1Q9Y5F3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHB1Q9Y5F3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHB1Q9Y5F3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.93■■□□□ 1.1
PCDHB1Q9Y5F3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHB1Q9Y5F3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHB1Q9Y5F3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.93■■□□□ 1.1
PCDHB1Q9Y5F3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.93■■□□□ 1.1
PCDHB1Q9Y5F3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB1Q9Y5F3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB1Q9Y5F3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB1Q9Y5F3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB1Q9Y5F3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
PCDHB1Q9Y5F3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.92■■□□□ 1.1
PCDHB1Q9Y5F3 ESRRAP2-201ENST00000418437 1549 ntBASIC21.92■■□□□ 1.1
PCDHB1Q9Y5F3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB1Q9Y5F3 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
PCDHB1Q9Y5F3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB1Q9Y5F3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.92■■□□□ 1.1
PCDHB1Q9Y5F3 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.92■■□□□ 1.1
PCDHB1Q9Y5F3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.92■■□□□ 1.1
PCDHB1Q9Y5F3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB1Q9Y5F3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB1Q9Y5F3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB1Q9Y5F3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB1Q9Y5F3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB1Q9Y5F3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.91■■□□□ 1.1
PCDHB1Q9Y5F3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB1Q9Y5F3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDHB1Q9Y5F3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB1Q9Y5F3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.91■■□□□ 1.1
PCDHB1Q9Y5F3 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB1Q9Y5F3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.91■■□□□ 1.1
PCDHB1Q9Y5F3 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDHB1Q9Y5F3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB1Q9Y5F3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB1Q9Y5F3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB1Q9Y5F3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB1Q9Y5F3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB1Q9Y5F3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
PCDHB1Q9Y5F3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB1Q9Y5F3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.9■■□□□ 1.1
PCDHB1Q9Y5F3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB1Q9Y5F3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.9■■□□□ 1.1
PCDHB1Q9Y5F3 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
PCDHB1Q9Y5F3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB1Q9Y5F3 AL499627.2-201ENST00000606283 725 ntBASIC21.9■■□□□ 1.1
PCDHB1Q9Y5F3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB1Q9Y5F3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB1Q9Y5F3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
PCDHB1Q9Y5F3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB1Q9Y5F3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB1Q9Y5F3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB1Q9Y5F3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB1Q9Y5F3 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
PCDHB1Q9Y5F3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
PCDHB1Q9Y5F3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHB1Q9Y5F3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms