Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.33■■□□□ 1.17
CHMP2BQ9UQN3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CHMP2BQ9UQN3 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC22.33■■□□□ 1.17
CHMP2BQ9UQN3 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CHMP2BQ9UQN3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.17
CHMP2BQ9UQN3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CHMP2BQ9UQN3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
CHMP2BQ9UQN3 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
CHMP2BQ9UQN3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CHMP2BQ9UQN3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.32■■□□□ 1.16
CHMP2BQ9UQN3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC22.32■■□□□ 1.16
CHMP2BQ9UQN3 FBXW4P1-201ENST00000426721 2239 ntBASIC22.32■■□□□ 1.16
CHMP2BQ9UQN3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.32■■□□□ 1.16
CHMP2BQ9UQN3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
CHMP2BQ9UQN3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.32■■□□□ 1.16
CHMP2BQ9UQN3 LINC01960-201ENST00000563759 1884 ntBASIC22.32■■□□□ 1.16
CHMP2BQ9UQN3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CHMP2BQ9UQN3 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.32■■□□□ 1.16
CHMP2BQ9UQN3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CHMP2BQ9UQN3 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
CHMP2BQ9UQN3 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CHMP2BQ9UQN3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
CHMP2BQ9UQN3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHMP2BQ9UQN3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHMP2BQ9UQN3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHMP2BQ9UQN3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CHMP2BQ9UQN3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.31■■□□□ 1.16
CHMP2BQ9UQN3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHMP2BQ9UQN3 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
CHMP2BQ9UQN3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHMP2BQ9UQN3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC22.3■■□□□ 1.16
CHMP2BQ9UQN3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.3■■□□□ 1.16
CHMP2BQ9UQN3 DUX4L4-201ENST00000566884 1269 ntBASIC22.3■■□□□ 1.16
CHMP2BQ9UQN3 AC092028.1-203ENST00000608262 953 ntBASIC22.3■■□□□ 1.16
CHMP2BQ9UQN3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.3■■□□□ 1.16
CHMP2BQ9UQN3 AC009086.3-201ENST00000623486 1008 ntBASIC22.3■■□□□ 1.16
CHMP2BQ9UQN3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
CHMP2BQ9UQN3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHMP2BQ9UQN3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHMP2BQ9UQN3 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHMP2BQ9UQN3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.3■■□□□ 1.16
CHMP2BQ9UQN3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHMP2BQ9UQN3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHMP2BQ9UQN3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHMP2BQ9UQN3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHMP2BQ9UQN3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
CHMP2BQ9UQN3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC22.29■■□□□ 1.16
CHMP2BQ9UQN3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CHMP2BQ9UQN3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.29■■□□□ 1.16
CHMP2BQ9UQN3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHMP2BQ9UQN3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHMP2BQ9UQN3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHMP2BQ9UQN3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.28■■□□□ 1.16
CHMP2BQ9UQN3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHMP2BQ9UQN3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
CHMP2BQ9UQN3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC22.28■■□□□ 1.16
CHMP2BQ9UQN3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHMP2BQ9UQN3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.28■■□□□ 1.16
CHMP2BQ9UQN3 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHMP2BQ9UQN3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CHMP2BQ9UQN3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
CHMP2BQ9UQN3 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC22.28■■□□□ 1.16
CHMP2BQ9UQN3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CHMP2BQ9UQN3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.28■■□□□ 1.16
CHMP2BQ9UQN3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.28■■□□□ 1.16
CHMP2BQ9UQN3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
CHMP2BQ9UQN3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHMP2BQ9UQN3 AC009102.2-201ENST00000606772 1639 ntBASIC22.28■■□□□ 1.16
CHMP2BQ9UQN3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
CHMP2BQ9UQN3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CHMP2BQ9UQN3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
CHMP2BQ9UQN3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.27■■□□□ 1.16
CHMP2BQ9UQN3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.27■■□□□ 1.16
CHMP2BQ9UQN3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CHMP2BQ9UQN3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CHMP2BQ9UQN3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CHMP2BQ9UQN3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
CHMP2BQ9UQN3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC22.27■■□□□ 1.16
CHMP2BQ9UQN3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
CHMP2BQ9UQN3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CHMP2BQ9UQN3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.27■■□□□ 1.16
CHMP2BQ9UQN3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CHMP2BQ9UQN3 AL137060.1-201ENST00000618151 2648 ntBASIC22.26■■□□□ 1.15
CHMP2BQ9UQN3 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
CHMP2BQ9UQN3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.26■■□□□ 1.15
CHMP2BQ9UQN3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.26■■□□□ 1.15
CHMP2BQ9UQN3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CHMP2BQ9UQN3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CHMP2BQ9UQN3 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.26■■□□□ 1.15
CHMP2BQ9UQN3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CHMP2BQ9UQN3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CHMP2BQ9UQN3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CHMP2BQ9UQN3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.25■■□□□ 1.15
CHMP2BQ9UQN3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CHMP2BQ9UQN3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CHMP2BQ9UQN3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CHMP2BQ9UQN3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC22.25■■□□□ 1.15
CHMP2BQ9UQN3 AC004687.1-201ENST00000579003 1625 ntBASIC22.25■■□□□ 1.15
CHMP2BQ9UQN3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.25■■□□□ 1.15
CHMP2BQ9UQN3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms