Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
CCNL1Q9UK58 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC28.38■■■□□ 2.13
CCNL1Q9UK58 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC28.38■■■□□ 2.13
CCNL1Q9UK58 PARP1-210ENST00000629232 477 ntTSL 5 BASIC28.38■■■□□ 2.13
CCNL1Q9UK58 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CCNL1Q9UK58 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC28.38■■■□□ 2.13
CCNL1Q9UK58 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CCNL1Q9UK58 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
CCNL1Q9UK58 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC28.37■■■□□ 2.13
CCNL1Q9UK58 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC28.37■■■□□ 2.13
CCNL1Q9UK58 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC28.37■■■□□ 2.13
CCNL1Q9UK58 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
CCNL1Q9UK58 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
CCNL1Q9UK58 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
CCNL1Q9UK58 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC28.37■■■□□ 2.13
CCNL1Q9UK58 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC28.37■■■□□ 2.13
CCNL1Q9UK58 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC28.37■■■□□ 2.13
CCNL1Q9UK58 KLF13-207ENST00000560473 489 ntTSL 3 BASIC28.37■■■□□ 2.13
CCNL1Q9UK58 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC28.37■■■□□ 2.13
CCNL1Q9UK58 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC28.37■■■□□ 2.13
CCNL1Q9UK58 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
CCNL1Q9UK58 EI24-211ENST00000534546 1544 ntTSL 2 BASIC28.37■■■□□ 2.13
CCNL1Q9UK58 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
CCNL1Q9UK58 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
CCNL1Q9UK58 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC28.36■■■□□ 2.13
CCNL1Q9UK58 GUSBP6-202ENST00000438529 1198 ntBASIC28.36■■■□□ 2.13
CCNL1Q9UK58 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC28.36■■■□□ 2.13
CCNL1Q9UK58 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CCNL1Q9UK58 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CCNL1Q9UK58 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
CCNL1Q9UK58 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC28.35■■■□□ 2.13
CCNL1Q9UK58 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC28.35■■■□□ 2.13
CCNL1Q9UK58 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC28.35■■■□□ 2.13
CCNL1Q9UK58 AC068587.7-201ENST00000641602 218 ntBASIC28.35■■■□□ 2.13
CCNL1Q9UK58 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC28.35■■■□□ 2.13
CCNL1Q9UK58 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
CCNL1Q9UK58 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CCNL1Q9UK58 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
CCNL1Q9UK58 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC28.34■■■□□ 2.13
CCNL1Q9UK58 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC28.34■■■□□ 2.13
CCNL1Q9UK58 SLC7A5P2-201ENST00000553010 536 ntBASIC28.34■■■□□ 2.13
CCNL1Q9UK58 AL138781.1-201ENST00000566567 1274 ntBASIC28.34■■■□□ 2.13
CCNL1Q9UK58 MIR4651-201ENST00000582622 73 ntBASIC28.34■■■□□ 2.13
CCNL1Q9UK58 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC28.34■■■□□ 2.13
CCNL1Q9UK58 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC28.34■■■□□ 2.13
CCNL1Q9UK58 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
CCNL1Q9UK58 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CCNL1Q9UK58 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
CCNL1Q9UK58 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC28.33■■■□□ 2.13
CCNL1Q9UK58 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC28.33■■■□□ 2.13
CCNL1Q9UK58 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC28.33■■■□□ 2.13
CCNL1Q9UK58 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC28.33■■■□□ 2.13
CCNL1Q9UK58 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CCNL1Q9UK58 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
CCNL1Q9UK58 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
CCNL1Q9UK58 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC28.32■■■□□ 2.12
CCNL1Q9UK58 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CCNL1Q9UK58 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC28.32■■■□□ 2.12
CCNL1Q9UK58 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC28.32■■■□□ 2.12
CCNL1Q9UK58 TFG-210ENST00000620299 1289 ntTSL 5 BASIC28.32■■■□□ 2.12
CCNL1Q9UK58 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC28.32■■■□□ 2.12
CCNL1Q9UK58 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC28.32■■■□□ 2.12
CCNL1Q9UK58 AC004687.1-201ENST00000579003 1625 ntBASIC28.32■■■□□ 2.12
CCNL1Q9UK58 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CCNL1Q9UK58 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC28.32■■■□□ 2.12
CCNL1Q9UK58 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
CCNL1Q9UK58 METTL15-202ENST00000403099 795 ntTSL 5 BASIC28.31■■■□□ 2.12
CCNL1Q9UK58 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC28.31■■■□□ 2.12
CCNL1Q9UK58 AC010141.3-201ENST00000456659 717 ntBASIC28.31■■■□□ 2.12
CCNL1Q9UK58 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC28.31■■■□□ 2.12
CCNL1Q9UK58 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
CCNL1Q9UK58 AC231657.2-201ENST00000624556 255 ntBASIC28.31■■■□□ 2.12
CCNL1Q9UK58 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC28.31■■■□□ 2.12
CCNL1Q9UK58 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CCNL1Q9UK58 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CCNL1Q9UK58 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
CCNL1Q9UK58 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
CCNL1Q9UK58 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CCNL1Q9UK58 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CCNL1Q9UK58 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
CCNL1Q9UK58 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CCNL1Q9UK58 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC28.3■■■□□ 2.12
CCNL1Q9UK58 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
CCNL1Q9UK58 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CCNL1Q9UK58 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC28.3■■■□□ 2.12
CCNL1Q9UK58 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CCNL1Q9UK58 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
CCNL1Q9UK58 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CCNL1Q9UK58 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC28.3■■■□□ 2.12
CCNL1Q9UK58 AC087239.1-201ENST00000622671 572 ntBASIC28.3■■■□□ 2.12
CCNL1Q9UK58 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CCNL1Q9UK58 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC28.29■■■□□ 2.12
CCNL1Q9UK58 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
CCNL1Q9UK58 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
CCNL1Q9UK58 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC28.29■■■□□ 2.12
CCNL1Q9UK58 DUX4L16-201ENST00000555130 1264 ntBASIC28.29■■■□□ 2.12
CCNL1Q9UK58 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC28.29■■■□□ 2.12
CCNL1Q9UK58 AC005181.1-201ENST00000604782 1256 ntBASIC28.29■■■□□ 2.12
CCNL1Q9UK58 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CCNL1Q9UK58 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms