Protein–RNA interactions for Protein: Q9UD57

NKX1-2, NK1 transcription factor-related protein 2, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-2Q9UD57 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
NKX1-2Q9UD57 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
NKX1-2Q9UD57 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
NKX1-2Q9UD57 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NKX1-2Q9UD57 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.95■□□□□ 0.94
NKX1-2Q9UD57 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NKX1-2Q9UD57 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NKX1-2Q9UD57 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.95■□□□□ 0.94
NKX1-2Q9UD57 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NKX1-2Q9UD57 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.95■□□□□ 0.94
NKX1-2Q9UD57 AP006261.1-201ENST00000584783 668 ntBASIC20.95■□□□□ 0.94
NKX1-2Q9UD57 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.95■□□□□ 0.94
NKX1-2Q9UD57 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NKX1-2Q9UD57 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.95■□□□□ 0.94
NKX1-2Q9UD57 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NKX1-2Q9UD57 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NKX1-2Q9UD57 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NKX1-2Q9UD57 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.94■□□□□ 0.94
NKX1-2Q9UD57 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.94■□□□□ 0.94
NKX1-2Q9UD57 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NKX1-2Q9UD57 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NKX1-2Q9UD57 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NKX1-2Q9UD57 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NKX1-2Q9UD57 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NKX1-2Q9UD57 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
NKX1-2Q9UD57 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.94■□□□□ 0.94
NKX1-2Q9UD57 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NKX1-2Q9UD57 Z98882.1-201ENST00000622160 2253 ntBASIC20.94■□□□□ 0.94
NKX1-2Q9UD57 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
NKX1-2Q9UD57 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
NKX1-2Q9UD57 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
NKX1-2Q9UD57 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.94■□□□□ 0.94
NKX1-2Q9UD57 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NKX1-2Q9UD57 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NKX1-2Q9UD57 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NKX1-2Q9UD57 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NKX1-2Q9UD57 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
NKX1-2Q9UD57 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.93■□□□□ 0.94
NKX1-2Q9UD57 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.93■□□□□ 0.94
NKX1-2Q9UD57 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
NKX1-2Q9UD57 AL022069.1-201ENST00000568025 1636 ntBASIC20.93■□□□□ 0.94
NKX1-2Q9UD57 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
NKX1-2Q9UD57 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.92■□□□□ 0.94
NKX1-2Q9UD57 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.92■□□□□ 0.94
NKX1-2Q9UD57 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NKX1-2Q9UD57 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NKX1-2Q9UD57 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NKX1-2Q9UD57 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NKX1-2Q9UD57 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
NKX1-2Q9UD57 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.91■□□□□ 0.94
NKX1-2Q9UD57 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NKX1-2Q9UD57 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.91■□□□□ 0.94
NKX1-2Q9UD57 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
NKX1-2Q9UD57 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
NKX1-2Q9UD57 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
NKX1-2Q9UD57 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NKX1-2Q9UD57 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.91■□□□□ 0.94
NKX1-2Q9UD57 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NKX1-2Q9UD57 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NKX1-2Q9UD57 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NKX1-2Q9UD57 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.9■□□□□ 0.94
NKX1-2Q9UD57 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.9■□□□□ 0.94
NKX1-2Q9UD57 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NKX1-2Q9UD57 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.9■□□□□ 0.94
NKX1-2Q9UD57 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.9■□□□□ 0.94
NKX1-2Q9UD57 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
NKX1-2Q9UD57 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NKX1-2Q9UD57 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NKX1-2Q9UD57 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.89■□□□□ 0.94
NKX1-2Q9UD57 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NKX1-2Q9UD57 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
NKX1-2Q9UD57 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
NKX1-2Q9UD57 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
NKX1-2Q9UD57 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
NKX1-2Q9UD57 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.89■□□□□ 0.93
NKX1-2Q9UD57 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.89■□□□□ 0.93
NKX1-2Q9UD57 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NKX1-2Q9UD57 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
NKX1-2Q9UD57 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.89■□□□□ 0.93
NKX1-2Q9UD57 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.89■□□□□ 0.93
NKX1-2Q9UD57 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.89■□□□□ 0.93
NKX1-2Q9UD57 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NKX1-2Q9UD57 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
NKX1-2Q9UD57 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.88■□□□□ 0.93
NKX1-2Q9UD57 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NKX1-2Q9UD57 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.88■□□□□ 0.93
NKX1-2Q9UD57 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.88■□□□□ 0.93
NKX1-2Q9UD57 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
NKX1-2Q9UD57 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
NKX1-2Q9UD57 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.88■□□□□ 0.93
NKX1-2Q9UD57 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
NKX1-2Q9UD57 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
NKX1-2Q9UD57 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
NKX1-2Q9UD57 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NKX1-2Q9UD57 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.88■□□□□ 0.93
NKX1-2Q9UD57 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
NKX1-2Q9UD57 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NKX1-2Q9UD57 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NKX1-2Q9UD57 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NKX1-2Q9UD57 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms