Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC26.22■■□□□ 1.79
DDX4Q9NQI0 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
DDX4Q9NQI0 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC26.22■■□□□ 1.79
DDX4Q9NQI0 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
DDX4Q9NQI0 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
DDX4Q9NQI0 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
DDX4Q9NQI0 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
DDX4Q9NQI0 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
DDX4Q9NQI0 MFF-208ENST00000409616 1247 ntTSL 5 BASIC26.21■■□□□ 1.79
DDX4Q9NQI0 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC26.21■■□□□ 1.79
DDX4Q9NQI0 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC26.21■■□□□ 1.79
DDX4Q9NQI0 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
DDX4Q9NQI0 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
DDX4Q9NQI0 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
DDX4Q9NQI0 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
DDX4Q9NQI0 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.79
DDX4Q9NQI0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC26.2■■□□□ 1.79
DDX4Q9NQI0 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
DDX4Q9NQI0 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
DDX4Q9NQI0 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC26.2■■□□□ 1.78
DDX4Q9NQI0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC26.2■■□□□ 1.78
DDX4Q9NQI0 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
DDX4Q9NQI0 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
DDX4Q9NQI0 GXYLT1P2-201ENST00000433312 1230 ntBASIC26.2■■□□□ 1.78
DDX4Q9NQI0 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
DDX4Q9NQI0 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
DDX4Q9NQI0 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
DDX4Q9NQI0 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC26.19■■□□□ 1.78
DDX4Q9NQI0 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
DDX4Q9NQI0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
DDX4Q9NQI0 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
DDX4Q9NQI0 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC26.19■■□□□ 1.78
DDX4Q9NQI0 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
DDX4Q9NQI0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
DDX4Q9NQI0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
DDX4Q9NQI0 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
DDX4Q9NQI0 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC26.18■■□□□ 1.78
DDX4Q9NQI0 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
DDX4Q9NQI0 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC26.18■■□□□ 1.78
DDX4Q9NQI0 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC26.18■■□□□ 1.78
DDX4Q9NQI0 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC26.18■■□□□ 1.78
DDX4Q9NQI0 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
DDX4Q9NQI0 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
DDX4Q9NQI0 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
DDX4Q9NQI0 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
DDX4Q9NQI0 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
DDX4Q9NQI0 DLX3-202ENST00000512495 834 ntTSL 2 BASIC26.17■■□□□ 1.78
DDX4Q9NQI0 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC26.17■■□□□ 1.78
DDX4Q9NQI0 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC26.17■■□□□ 1.78
DDX4Q9NQI0 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
DDX4Q9NQI0 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
DDX4Q9NQI0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
DDX4Q9NQI0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
DDX4Q9NQI0 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
DDX4Q9NQI0 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
DDX4Q9NQI0 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
DDX4Q9NQI0 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
DDX4Q9NQI0 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
DDX4Q9NQI0 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC26.16■■□□□ 1.78
DDX4Q9NQI0 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
DDX4Q9NQI0 SMUG1P1-201ENST00000590640 811 ntBASIC26.16■■□□□ 1.78
DDX4Q9NQI0 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC26.16■■□□□ 1.78
DDX4Q9NQI0 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC26.16■■□□□ 1.78
DDX4Q9NQI0 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC26.15■■□□□ 1.78
DDX4Q9NQI0 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
DDX4Q9NQI0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.15■■□□□ 1.78
DDX4Q9NQI0 AC010141.3-201ENST00000456659 717 ntBASIC26.15■■□□□ 1.78
DDX4Q9NQI0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC26.15■■□□□ 1.78
DDX4Q9NQI0 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC26.15■■□□□ 1.78
DDX4Q9NQI0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
DDX4Q9NQI0 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
DDX4Q9NQI0 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
DDX4Q9NQI0 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
DDX4Q9NQI0 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC26.14■■□□□ 1.78
DDX4Q9NQI0 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC26.14■■□□□ 1.78
DDX4Q9NQI0 AC068587.7-201ENST00000641602 218 ntBASIC26.14■■□□□ 1.78
DDX4Q9NQI0 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC26.14■■□□□ 1.78
DDX4Q9NQI0 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC26.14■■□□□ 1.78
DDX4Q9NQI0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.77
DDX4Q9NQI0 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
DDX4Q9NQI0 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC26.13■■□□□ 1.77
DDX4Q9NQI0 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC26.13■■□□□ 1.77
DDX4Q9NQI0 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
DDX4Q9NQI0 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC26.13■■□□□ 1.77
DDX4Q9NQI0 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC26.13■■□□□ 1.77
DDX4Q9NQI0 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC26.12■■□□□ 1.77
DDX4Q9NQI0 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC26.12■■□□□ 1.77
DDX4Q9NQI0 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
DDX4Q9NQI0 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
DDX4Q9NQI0 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC26.12■■□□□ 1.77
DDX4Q9NQI0 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
DDX4Q9NQI0 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
DDX4Q9NQI0 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
DDX4Q9NQI0 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC26.12■■□□□ 1.77
DDX4Q9NQI0 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC26.12■■□□□ 1.77
DDX4Q9NQI0 BX005040.4-201ENST00000637145 1518 ntBASIC26.12■■□□□ 1.77
DDX4Q9NQI0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC26.12■■□□□ 1.77
DDX4Q9NQI0 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
DDX4Q9NQI0 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
DDX4Q9NQI0 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms