Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.84■□□□□ 0.77
HINT3Q9NQE9 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.84■□□□□ 0.77
HINT3Q9NQE9 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HINT3Q9NQE9 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
HINT3Q9NQE9 FBXW4P1-201ENST00000426721 2239 ntBASIC19.84■□□□□ 0.77
HINT3Q9NQE9 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HINT3Q9NQE9 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
HINT3Q9NQE9 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
HINT3Q9NQE9 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HINT3Q9NQE9 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
HINT3Q9NQE9 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.83■□□□□ 0.77
HINT3Q9NQE9 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HINT3Q9NQE9 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.83■□□□□ 0.77
HINT3Q9NQE9 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.83■□□□□ 0.77
HINT3Q9NQE9 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.83■□□□□ 0.77
HINT3Q9NQE9 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HINT3Q9NQE9 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HINT3Q9NQE9 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.83■□□□□ 0.76
HINT3Q9NQE9 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HINT3Q9NQE9 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
HINT3Q9NQE9 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HINT3Q9NQE9 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HINT3Q9NQE9 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.82■□□□□ 0.76
HINT3Q9NQE9 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HINT3Q9NQE9 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.82■□□□□ 0.76
HINT3Q9NQE9 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.82■□□□□ 0.76
HINT3Q9NQE9 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.82■□□□□ 0.76
HINT3Q9NQE9 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
HINT3Q9NQE9 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.82■□□□□ 0.76
HINT3Q9NQE9 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
HINT3Q9NQE9 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HINT3Q9NQE9 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.81■□□□□ 0.76
HINT3Q9NQE9 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.81■□□□□ 0.76
HINT3Q9NQE9 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HINT3Q9NQE9 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HINT3Q9NQE9 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HINT3Q9NQE9 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.81■□□□□ 0.76
HINT3Q9NQE9 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.81■□□□□ 0.76
HINT3Q9NQE9 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
HINT3Q9NQE9 AC092028.1-203ENST00000608262 953 ntBASIC19.81■□□□□ 0.76
HINT3Q9NQE9 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HINT3Q9NQE9 LINC01529-204ENST00000636474 1715 ntBASIC19.81■□□□□ 0.76
HINT3Q9NQE9 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HINT3Q9NQE9 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
HINT3Q9NQE9 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
HINT3Q9NQE9 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
HINT3Q9NQE9 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HINT3Q9NQE9 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
HINT3Q9NQE9 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HINT3Q9NQE9 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.8■□□□□ 0.76
HINT3Q9NQE9 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
HINT3Q9NQE9 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.8■□□□□ 0.76
HINT3Q9NQE9 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HINT3Q9NQE9 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HINT3Q9NQE9 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HINT3Q9NQE9 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.79■□□□□ 0.76
HINT3Q9NQE9 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HINT3Q9NQE9 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.79■□□□□ 0.76
HINT3Q9NQE9 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HINT3Q9NQE9 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.79■□□□□ 0.76
HINT3Q9NQE9 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
HINT3Q9NQE9 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
HINT3Q9NQE9 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HINT3Q9NQE9 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HINT3Q9NQE9 TSPY9P-201ENST00000440215 945 ntBASIC19.79■□□□□ 0.76
HINT3Q9NQE9 TSPY11P-201ENST00000442607 1045 ntBASIC19.79■□□□□ 0.76
HINT3Q9NQE9 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
HINT3Q9NQE9 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
HINT3Q9NQE9 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HINT3Q9NQE9 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.79■□□□□ 0.76
HINT3Q9NQE9 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
HINT3Q9NQE9 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.78■□□□□ 0.76
HINT3Q9NQE9 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
HINT3Q9NQE9 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.78■□□□□ 0.76
HINT3Q9NQE9 AL356441.2-201ENST00000443009 864 ntBASIC19.78■□□□□ 0.76
HINT3Q9NQE9 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
HINT3Q9NQE9 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HINT3Q9NQE9 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.78■□□□□ 0.76
HINT3Q9NQE9 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
HINT3Q9NQE9 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HINT3Q9NQE9 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HINT3Q9NQE9 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
HINT3Q9NQE9 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HINT3Q9NQE9 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HINT3Q9NQE9 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
HINT3Q9NQE9 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HINT3Q9NQE9 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.77■□□□□ 0.76
HINT3Q9NQE9 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.77■□□□□ 0.76
HINT3Q9NQE9 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.77■□□□□ 0.76
HINT3Q9NQE9 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
HINT3Q9NQE9 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HINT3Q9NQE9 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HINT3Q9NQE9 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
HINT3Q9NQE9 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
HINT3Q9NQE9 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HINT3Q9NQE9 FP325331.1-202ENST00000623531 1380 ntBASIC19.76■□□□□ 0.75
HINT3Q9NQE9 UNC93B8-201ENST00000511903 705 ntBASIC19.76■□□□□ 0.75
HINT3Q9NQE9 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.76■□□□□ 0.75
HINT3Q9NQE9 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
HINT3Q9NQE9 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms