Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
LRTM1Q9HBL6 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LRTM1Q9HBL6 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LRTM1Q9HBL6 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.13■□□□□ 0.97
LRTM1Q9HBL6 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.13■□□□□ 0.97
LRTM1Q9HBL6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.13■□□□□ 0.97
LRTM1Q9HBL6 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
LRTM1Q9HBL6 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.13■□□□□ 0.97
LRTM1Q9HBL6 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LRTM1Q9HBL6 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRTM1Q9HBL6 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRTM1Q9HBL6 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRTM1Q9HBL6 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
LRTM1Q9HBL6 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
LRTM1Q9HBL6 AL451085.2-201ENST00000605085 799 ntBASIC21.12■□□□□ 0.97
LRTM1Q9HBL6 C11orf96-202ENST00000528572 1834 ntBASIC21.12■□□□□ 0.97
LRTM1Q9HBL6 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRTM1Q9HBL6 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRTM1Q9HBL6 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRTM1Q9HBL6 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.12■□□□□ 0.97
LRTM1Q9HBL6 C17orf82-201ENST00000623772 1530 ntBASIC21.12■□□□□ 0.97
LRTM1Q9HBL6 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.12■□□□□ 0.97
LRTM1Q9HBL6 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LRTM1Q9HBL6 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRTM1Q9HBL6 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRTM1Q9HBL6 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LRTM1Q9HBL6 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
LRTM1Q9HBL6 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRTM1Q9HBL6 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.11■□□□□ 0.97
LRTM1Q9HBL6 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.11■□□□□ 0.97
LRTM1Q9HBL6 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRTM1Q9HBL6 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRTM1Q9HBL6 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.11■□□□□ 0.97
LRTM1Q9HBL6 AC004687.1-201ENST00000579003 1625 ntBASIC21.11■□□□□ 0.97
LRTM1Q9HBL6 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.11■□□□□ 0.97
LRTM1Q9HBL6 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.1■□□□□ 0.97
LRTM1Q9HBL6 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
LRTM1Q9HBL6 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRTM1Q9HBL6 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRTM1Q9HBL6 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
LRTM1Q9HBL6 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRTM1Q9HBL6 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRTM1Q9HBL6 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRTM1Q9HBL6 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRTM1Q9HBL6 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRTM1Q9HBL6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.1■□□□□ 0.97
LRTM1Q9HBL6 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRTM1Q9HBL6 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.09■□□□□ 0.97
LRTM1Q9HBL6 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LRTM1Q9HBL6 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRTM1Q9HBL6 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRTM1Q9HBL6 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRTM1Q9HBL6 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
LRTM1Q9HBL6 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRTM1Q9HBL6 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRTM1Q9HBL6 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRTM1Q9HBL6 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRTM1Q9HBL6 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRTM1Q9HBL6 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.09■□□□□ 0.97
LRTM1Q9HBL6 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
LRTM1Q9HBL6 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.08■□□□□ 0.97
LRTM1Q9HBL6 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LRTM1Q9HBL6 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LRTM1Q9HBL6 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.08■□□□□ 0.97
LRTM1Q9HBL6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LRTM1Q9HBL6 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LRTM1Q9HBL6 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.97
LRTM1Q9HBL6 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LRTM1Q9HBL6 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LRTM1Q9HBL6 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
LRTM1Q9HBL6 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.08■□□□□ 0.96
LRTM1Q9HBL6 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LRTM1Q9HBL6 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRTM1Q9HBL6 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRTM1Q9HBL6 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRTM1Q9HBL6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LRTM1Q9HBL6 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
LRTM1Q9HBL6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.07■□□□□ 0.96
LRTM1Q9HBL6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRTM1Q9HBL6 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
LRTM1Q9HBL6 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRTM1Q9HBL6 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRTM1Q9HBL6 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.06■□□□□ 0.96
LRTM1Q9HBL6 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRTM1Q9HBL6 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.06■□□□□ 0.96
LRTM1Q9HBL6 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRTM1Q9HBL6 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.06■□□□□ 0.96
LRTM1Q9HBL6 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LRTM1Q9HBL6 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.06■□□□□ 0.96
LRTM1Q9HBL6 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRTM1Q9HBL6 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRTM1Q9HBL6 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRTM1Q9HBL6 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
LRTM1Q9HBL6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRTM1Q9HBL6 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRTM1Q9HBL6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
LRTM1Q9HBL6 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRTM1Q9HBL6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRTM1Q9HBL6 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRTM1Q9HBL6 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms