Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
VPS33BQ9H267 MIR663A-201ENST00000385250 93 ntBASIC26.84■■□□□ 1.89
VPS33BQ9H267 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC26.84■■□□□ 1.89
VPS33BQ9H267 AC079140.4-201ENST00000507448 529 ntBASIC26.84■■□□□ 1.89
VPS33BQ9H267 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC26.84■■□□□ 1.89
VPS33BQ9H267 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC26.84■■□□□ 1.89
VPS33BQ9H267 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC26.84■■□□□ 1.89
VPS33BQ9H267 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
VPS33BQ9H267 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
VPS33BQ9H267 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
VPS33BQ9H267 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
VPS33BQ9H267 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
VPS33BQ9H267 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
VPS33BQ9H267 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
VPS33BQ9H267 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
VPS33BQ9H267 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC26.83■■□□□ 1.89
VPS33BQ9H267 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC26.83■■□□□ 1.89
VPS33BQ9H267 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC26.83■■□□□ 1.89
VPS33BQ9H267 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC26.83■■□□□ 1.89
VPS33BQ9H267 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
VPS33BQ9H267 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
VPS33BQ9H267 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC26.83■■□□□ 1.89
VPS33BQ9H267 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC26.83■■□□□ 1.89
VPS33BQ9H267 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC26.83■■□□□ 1.88
VPS33BQ9H267 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
VPS33BQ9H267 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC26.82■■□□□ 1.88
VPS33BQ9H267 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC26.82■■□□□ 1.88
VPS33BQ9H267 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC26.82■■□□□ 1.88
VPS33BQ9H267 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
VPS33BQ9H267 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
VPS33BQ9H267 OXCT2P1-201ENST00000447263 1535 ntBASIC26.81■■□□□ 1.88
VPS33BQ9H267 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
VPS33BQ9H267 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
VPS33BQ9H267 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
VPS33BQ9H267 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
VPS33BQ9H267 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
VPS33BQ9H267 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
VPS33BQ9H267 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
VPS33BQ9H267 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
VPS33BQ9H267 CD99P1-205ENST00000527459 561 ntBASIC26.8■■□□□ 1.88
VPS33BQ9H267 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC26.8■■□□□ 1.88
VPS33BQ9H267 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC26.8■■□□□ 1.88
VPS33BQ9H267 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC26.8■■□□□ 1.88
VPS33BQ9H267 AL121832.2-201ENST00000610979 668 ntBASIC26.8■■□□□ 1.88
VPS33BQ9H267 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
VPS33BQ9H267 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
VPS33BQ9H267 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
VPS33BQ9H267 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
VPS33BQ9H267 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
VPS33BQ9H267 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
VPS33BQ9H267 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
VPS33BQ9H267 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC26.79■■□□□ 1.88
VPS33BQ9H267 WT1-AS_3.1-201ENST00000613262 234 ntBASIC26.79■■□□□ 1.88
VPS33BQ9H267 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
VPS33BQ9H267 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
VPS33BQ9H267 AC004687.1-201ENST00000579003 1625 ntBASIC26.79■■□□□ 1.88
VPS33BQ9H267 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
VPS33BQ9H267 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC26.78■■□□□ 1.88
VPS33BQ9H267 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC26.78■■□□□ 1.88
VPS33BQ9H267 MFSD11-216ENST00000590393 1141 ntBASIC26.78■■□□□ 1.88
VPS33BQ9H267 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
VPS33BQ9H267 AC231657.2-201ENST00000624556 255 ntBASIC26.78■■□□□ 1.88
VPS33BQ9H267 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC26.78■■□□□ 1.88
VPS33BQ9H267 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
VPS33BQ9H267 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
VPS33BQ9H267 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
VPS33BQ9H267 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC26.77■■□□□ 1.88
VPS33BQ9H267 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
VPS33BQ9H267 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC26.77■■□□□ 1.88
VPS33BQ9H267 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
VPS33BQ9H267 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
VPS33BQ9H267 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
VPS33BQ9H267 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
VPS33BQ9H267 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
VPS33BQ9H267 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC26.77■■□□□ 1.88
VPS33BQ9H267 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC26.77■■□□□ 1.88
VPS33BQ9H267 GAMT-205ENST00000640762 751 ntTSL 5 BASIC26.77■■□□□ 1.88
VPS33BQ9H267 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC26.76■■□□□ 1.87
VPS33BQ9H267 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC26.76■■□□□ 1.87
VPS33BQ9H267 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
VPS33BQ9H267 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC26.76■■□□□ 1.87
VPS33BQ9H267 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC26.75■■□□□ 1.87
VPS33BQ9H267 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
VPS33BQ9H267 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
VPS33BQ9H267 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC26.75■■□□□ 1.87
VPS33BQ9H267 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
VPS33BQ9H267 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC26.75■■□□□ 1.87
VPS33BQ9H267 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC26.74■■□□□ 1.87
VPS33BQ9H267 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
VPS33BQ9H267 TSPY6P-201ENST00000448518 926 ntBASIC26.74■■□□□ 1.87
VPS33BQ9H267 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC26.74■■□□□ 1.87
VPS33BQ9H267 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC26.74■■□□□ 1.87
VPS33BQ9H267 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
VPS33BQ9H267 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC26.74■■□□□ 1.87
VPS33BQ9H267 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
VPS33BQ9H267 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC26.73■■□□□ 1.87
VPS33BQ9H267 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
VPS33BQ9H267 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
VPS33BQ9H267 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
VPS33BQ9H267 AC083906.2-201ENST00000511578 360 ntBASIC26.73■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms