Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB40CQ96S21 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB40CQ96S21 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC17.78■□□□□ 0.44
RAB40CQ96S21 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.78■□□□□ 0.44
RAB40CQ96S21 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
RAB40CQ96S21 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB40CQ96S21 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC17.78■□□□□ 0.44
RAB40CQ96S21 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB40CQ96S21 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
RAB40CQ96S21 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAB40CQ96S21 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAB40CQ96S21 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RAB40CQ96S21 AC010542.4-201ENST00000563151 1910 ntBASIC17.77■□□□□ 0.44
RAB40CQ96S21 DUX4L9-201ENST00000449051 1259 ntBASIC17.77■□□□□ 0.44
RAB40CQ96S21 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC17.77■□□□□ 0.44
RAB40CQ96S21 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
RAB40CQ96S21 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAB40CQ96S21 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
RAB40CQ96S21 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RAB40CQ96S21 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RAB40CQ96S21 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
RAB40CQ96S21 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB40CQ96S21 AC144652.1-201ENST00000609974 1624 ntBASIC17.76■□□□□ 0.43
RAB40CQ96S21 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RAB40CQ96S21 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB40CQ96S21 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB40CQ96S21 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB40CQ96S21 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.76■□□□□ 0.43
RAB40CQ96S21 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.76■□□□□ 0.43
RAB40CQ96S21 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB40CQ96S21 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.76■□□□□ 0.43
RAB40CQ96S21 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB40CQ96S21 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.76■□□□□ 0.43
RAB40CQ96S21 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB40CQ96S21 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RAB40CQ96S21 SLC25A24-204ENST00000569674 2357 ntBASIC17.75■□□□□ 0.43
RAB40CQ96S21 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RAB40CQ96S21 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB40CQ96S21 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB40CQ96S21 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB40CQ96S21 AC004448.1-201ENST00000458332 883 ntBASIC17.75■□□□□ 0.43
RAB40CQ96S21 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB40CQ96S21 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RAB40CQ96S21 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.75■□□□□ 0.43
RAB40CQ96S21 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.75■□□□□ 0.43
RAB40CQ96S21 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC17.74■□□□□ 0.43
RAB40CQ96S21 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.74■□□□□ 0.43
RAB40CQ96S21 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB40CQ96S21 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB40CQ96S21 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC17.74■□□□□ 0.43
RAB40CQ96S21 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB40CQ96S21 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC17.74■□□□□ 0.43
RAB40CQ96S21 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAB40CQ96S21 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAB40CQ96S21 NTF6A-201ENST00000591175 560 ntBASIC17.74■□□□□ 0.43
RAB40CQ96S21 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB40CQ96S21 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB40CQ96S21 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
RAB40CQ96S21 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.74■□□□□ 0.43
RAB40CQ96S21 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.74■□□□□ 0.43
RAB40CQ96S21 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RAB40CQ96S21 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RAB40CQ96S21 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RAB40CQ96S21 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB40CQ96S21 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RAB40CQ96S21 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAB40CQ96S21 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB40CQ96S21 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAB40CQ96S21 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB40CQ96S21 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB40CQ96S21 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB40CQ96S21 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RAB40CQ96S21 KRT18P60-201ENST00000312876 1297 ntBASIC17.73■□□□□ 0.43
RAB40CQ96S21 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB40CQ96S21 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC17.73■□□□□ 0.43
RAB40CQ96S21 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAB40CQ96S21 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB40CQ96S21 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAB40CQ96S21 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAB40CQ96S21 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB40CQ96S21 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB40CQ96S21 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAB40CQ96S21 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB40CQ96S21 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB40CQ96S21 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RAB40CQ96S21 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB40CQ96S21 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
RAB40CQ96S21 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB40CQ96S21 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB40CQ96S21 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB40CQ96S21 HYI-210ENST00000486909 905 ntTSL 5 BASIC17.72■□□□□ 0.43
RAB40CQ96S21 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC17.72■□□□□ 0.43
RAB40CQ96S21 AC019171.1-201ENST00000601251 1056 ntBASIC17.72■□□□□ 0.43
RAB40CQ96S21 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB40CQ96S21 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB40CQ96S21 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB40CQ96S21 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB40CQ96S21 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
RAB40CQ96S21 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB40CQ96S21 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms