Protein–RNA interactions for Protein: Q96MN9

ZNF488, Zinc finger protein 488, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF488Q96MN9 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF488Q96MN9 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.65■□□□□ 0.58
ZNF488Q96MN9 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF488Q96MN9 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF488Q96MN9 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
ZNF488Q96MN9 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF488Q96MN9 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.65■□□□□ 0.58
ZNF488Q96MN9 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF488Q96MN9 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF488Q96MN9 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.64■□□□□ 0.58
ZNF488Q96MN9 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.64■□□□□ 0.58
ZNF488Q96MN9 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ZNF488Q96MN9 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF488Q96MN9 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.64■□□□□ 0.57
ZNF488Q96MN9 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF488Q96MN9 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF488Q96MN9 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ZNF488Q96MN9 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF488Q96MN9 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF488Q96MN9 pRNA.6-201ENST00000610482 90 ntBASIC18.64■□□□□ 0.57
ZNF488Q96MN9 pRNA.5-201ENST00000612139 90 ntBASIC18.64■□□□□ 0.57
ZNF488Q96MN9 pRNA.11-201ENST00000618423 90 ntBASIC18.64■□□□□ 0.57
ZNF488Q96MN9 pRNA.13-201ENST00000619112 90 ntBASIC18.64■□□□□ 0.57
ZNF488Q96MN9 AC241377.3-202ENST00000626088 1088 ntBASIC18.64■□□□□ 0.57
ZNF488Q96MN9 AC241585.3-202ENST00000628937 1088 ntBASIC18.64■□□□□ 0.57
ZNF488Q96MN9 AC245100.8-202ENST00000629247 1058 ntBASIC18.64■□□□□ 0.57
ZNF488Q96MN9 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF488Q96MN9 LINC01960-201ENST00000563759 1884 ntBASIC18.64■□□□□ 0.57
ZNF488Q96MN9 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.64■□□□□ 0.57
ZNF488Q96MN9 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF488Q96MN9 AC080038.3-201ENST00000623346 1952 ntBASIC18.64■□□□□ 0.57
ZNF488Q96MN9 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
ZNF488Q96MN9 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF488Q96MN9 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
ZNF488Q96MN9 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ZNF488Q96MN9 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF488Q96MN9 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ZNF488Q96MN9 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF488Q96MN9 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF488Q96MN9 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.63■□□□□ 0.57
ZNF488Q96MN9 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF488Q96MN9 SRD5A1P1-201ENST00000442297 786 ntBASIC18.63■□□□□ 0.57
ZNF488Q96MN9 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.63■□□□□ 0.57
ZNF488Q96MN9 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.63■□□□□ 0.57
ZNF488Q96MN9 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.63■□□□□ 0.57
ZNF488Q96MN9 MIR4466-201ENST00000606121 54 ntBASIC18.63■□□□□ 0.57
ZNF488Q96MN9 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.63■□□□□ 0.57
ZNF488Q96MN9 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.63■□□□□ 0.57
ZNF488Q96MN9 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF488Q96MN9 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.63■□□□□ 0.57
ZNF488Q96MN9 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.63■□□□□ 0.57
ZNF488Q96MN9 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF488Q96MN9 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF488Q96MN9 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF488Q96MN9 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF488Q96MN9 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF488Q96MN9 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF488Q96MN9 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF488Q96MN9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF488Q96MN9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF488Q96MN9 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF488Q96MN9 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF488Q96MN9 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF488Q96MN9 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF488Q96MN9 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF488Q96MN9 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF488Q96MN9 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF488Q96MN9 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.62■□□□□ 0.57
ZNF488Q96MN9 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.62■□□□□ 0.57
ZNF488Q96MN9 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.62■□□□□ 0.57
ZNF488Q96MN9 AL499627.2-201ENST00000606283 725 ntBASIC18.62■□□□□ 0.57
ZNF488Q96MN9 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF488Q96MN9 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.62■□□□□ 0.57
ZNF488Q96MN9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.62■□□□□ 0.57
ZNF488Q96MN9 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.62■□□□□ 0.57
ZNF488Q96MN9 AC127496.7-201ENST00000625110 1798 ntBASIC18.62■□□□□ 0.57
ZNF488Q96MN9 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
ZNF488Q96MN9 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ZNF488Q96MN9 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
ZNF488Q96MN9 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF488Q96MN9 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
ZNF488Q96MN9 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF488Q96MN9 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF488Q96MN9 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF488Q96MN9 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF488Q96MN9 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ZNF488Q96MN9 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF488Q96MN9 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF488Q96MN9 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF488Q96MN9 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF488Q96MN9 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF488Q96MN9 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF488Q96MN9 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF488Q96MN9 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF488Q96MN9 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF488Q96MN9 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF488Q96MN9 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF488Q96MN9 LINC00526-201ENST00000581067 1875 ntBASIC18.6■□□□□ 0.57
ZNF488Q96MN9 ECEL1P1-201ENST00000373592 1742 ntBASIC18.6■□□□□ 0.57
ZNF488Q96MN9 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms