Protein–RNA interactions for Protein: Q8WUY9

DEPDC1B, DEP domain-containing protein 1B, humanhuman

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1BQ8WUY9 KRT18P5-201ENST00000436075 1291 ntBASIC23.21■■□□□ 1.31
DEPDC1BQ8WUY9 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
DEPDC1BQ8WUY9 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
DEPDC1BQ8WUY9 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
DEPDC1BQ8WUY9 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
DEPDC1BQ8WUY9 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.2■■□□□ 1.3
DEPDC1BQ8WUY9 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
DEPDC1BQ8WUY9 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.2■■□□□ 1.3
DEPDC1BQ8WUY9 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC23.2■■□□□ 1.3
DEPDC1BQ8WUY9 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
DEPDC1BQ8WUY9 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
DEPDC1BQ8WUY9 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
DEPDC1BQ8WUY9 AC133637.1-201ENST00000624115 1537 ntBASIC23.2■■□□□ 1.3
DEPDC1BQ8WUY9 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
DEPDC1BQ8WUY9 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
DEPDC1BQ8WUY9 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
DEPDC1BQ8WUY9 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
DEPDC1BQ8WUY9 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.2■■□□□ 1.3
DEPDC1BQ8WUY9 AC022517.1-201ENST00000592429 346 ntBASIC23.2■■□□□ 1.3
DEPDC1BQ8WUY9 AL031602.1-201ENST00000633169 911 ntBASIC23.2■■□□□ 1.3
DEPDC1BQ8WUY9 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
DEPDC1BQ8WUY9 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
DEPDC1BQ8WUY9 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.2■■□□□ 1.3
DEPDC1BQ8WUY9 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
DEPDC1BQ8WUY9 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
DEPDC1BQ8WUY9 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
DEPDC1BQ8WUY9 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
DEPDC1BQ8WUY9 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
DEPDC1BQ8WUY9 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.19■■□□□ 1.3
DEPDC1BQ8WUY9 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
DEPDC1BQ8WUY9 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
DEPDC1BQ8WUY9 AL354811.1-201ENST00000610286 706 ntBASIC23.19■■□□□ 1.3
DEPDC1BQ8WUY9 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.19■■□□□ 1.3
DEPDC1BQ8WUY9 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.19■■□□□ 1.3
DEPDC1BQ8WUY9 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
DEPDC1BQ8WUY9 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DEPDC1BQ8WUY9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DEPDC1BQ8WUY9 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
DEPDC1BQ8WUY9 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DEPDC1BQ8WUY9 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
DEPDC1BQ8WUY9 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
DEPDC1BQ8WUY9 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.18■■□□□ 1.3
DEPDC1BQ8WUY9 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DEPDC1BQ8WUY9 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
DEPDC1BQ8WUY9 AC012414.1-201ENST00000556676 535 ntBASIC23.18■■□□□ 1.3
DEPDC1BQ8WUY9 DUX4L2-201ENST00000561772 1275 ntBASIC23.18■■□□□ 1.3
DEPDC1BQ8WUY9 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC23.18■■□□□ 1.3
DEPDC1BQ8WUY9 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.18■■□□□ 1.3
DEPDC1BQ8WUY9 DUX4L6-201ENST00000626483 1275 ntBASIC23.18■■□□□ 1.3
DEPDC1BQ8WUY9 DUX4L1-201ENST00000627662 1275 ntBASIC23.18■■□□□ 1.3
DEPDC1BQ8WUY9 DUX4L8-201ENST00000629013 1275 ntBASIC23.18■■□□□ 1.3
DEPDC1BQ8WUY9 DUX4L3-201ENST00000630187 1275 ntBASIC23.18■■□□□ 1.3
DEPDC1BQ8WUY9 DUX4L7-201ENST00000630678 1275 ntBASIC23.18■■□□□ 1.3
DEPDC1BQ8WUY9 DUX4L5-201ENST00000630834 1275 ntBASIC23.18■■□□□ 1.3
DEPDC1BQ8WUY9 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC23.18■■□□□ 1.3
DEPDC1BQ8WUY9 RARRES2P11-201ENST00000635158 484 ntBASIC23.18■■□□□ 1.3
DEPDC1BQ8WUY9 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DEPDC1BQ8WUY9 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
DEPDC1BQ8WUY9 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
DEPDC1BQ8WUY9 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DEPDC1BQ8WUY9 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
DEPDC1BQ8WUY9 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DEPDC1BQ8WUY9 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.17■■□□□ 1.3
DEPDC1BQ8WUY9 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.17■■□□□ 1.3
DEPDC1BQ8WUY9 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
DEPDC1BQ8WUY9 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
DEPDC1BQ8WUY9 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
DEPDC1BQ8WUY9 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
DEPDC1BQ8WUY9 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
DEPDC1BQ8WUY9 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
DEPDC1BQ8WUY9 AL499627.2-201ENST00000606283 725 ntBASIC23.17■■□□□ 1.3
DEPDC1BQ8WUY9 AL137784.2-201ENST00000607332 1000 ntBASIC23.17■■□□□ 1.3
DEPDC1BQ8WUY9 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC23.17■■□□□ 1.3
DEPDC1BQ8WUY9 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.17■■□□□ 1.3
DEPDC1BQ8WUY9 ANOS2P-203ENST00000472227 1816 ntBASIC23.17■■□□□ 1.3
DEPDC1BQ8WUY9 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.17■■□□□ 1.3
DEPDC1BQ8WUY9 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
DEPDC1BQ8WUY9 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.16■■□□□ 1.3
DEPDC1BQ8WUY9 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
DEPDC1BQ8WUY9 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
DEPDC1BQ8WUY9 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC23.16■■□□□ 1.3
DEPDC1BQ8WUY9 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC23.16■■□□□ 1.3
DEPDC1BQ8WUY9 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.16■■□□□ 1.3
DEPDC1BQ8WUY9 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.16■■□□□ 1.3
DEPDC1BQ8WUY9 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
DEPDC1BQ8WUY9 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC23.16■■□□□ 1.3
DEPDC1BQ8WUY9 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
DEPDC1BQ8WUY9 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
DEPDC1BQ8WUY9 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
DEPDC1BQ8WUY9 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.15■■□□□ 1.3
DEPDC1BQ8WUY9 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
DEPDC1BQ8WUY9 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
DEPDC1BQ8WUY9 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.15■■□□□ 1.3
DEPDC1BQ8WUY9 OR2I1P-207ENST00000453522 948 ntBASIC23.15■■□□□ 1.3
DEPDC1BQ8WUY9 AC090192.1-201ENST00000517740 490 ntBASIC23.15■■□□□ 1.3
DEPDC1BQ8WUY9 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.15■■□□□ 1.3
DEPDC1BQ8WUY9 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC23.15■■□□□ 1.3
DEPDC1BQ8WUY9 IKBKGP1-201ENST00000612193 1073 ntBASIC23.15■■□□□ 1.3
DEPDC1BQ8WUY9 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
DEPDC1BQ8WUY9 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms