Protein–RNA interactions for Protein: Q8NDX1

PSD4, PH and SEC7 domain-containing protein 4, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSD4Q8NDX1 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PSD4Q8NDX1 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PSD4Q8NDX1 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PSD4Q8NDX1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PSD4Q8NDX1 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PSD4Q8NDX1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PSD4Q8NDX1 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PSD4Q8NDX1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PSD4Q8NDX1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.59■□□□□ 0.89
PSD4Q8NDX1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PSD4Q8NDX1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PSD4Q8NDX1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PSD4Q8NDX1 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PSD4Q8NDX1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PSD4Q8NDX1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PSD4Q8NDX1 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.58■□□□□ 0.89
PSD4Q8NDX1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.58■□□□□ 0.89
PSD4Q8NDX1 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PSD4Q8NDX1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PSD4Q8NDX1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.58■□□□□ 0.89
PSD4Q8NDX1 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.58■□□□□ 0.88
PSD4Q8NDX1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
PSD4Q8NDX1 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
PSD4Q8NDX1 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PSD4Q8NDX1 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PSD4Q8NDX1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
PSD4Q8NDX1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.58■□□□□ 0.88
PSD4Q8NDX1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PSD4Q8NDX1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PSD4Q8NDX1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
PSD4Q8NDX1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.57■□□□□ 0.88
PSD4Q8NDX1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PSD4Q8NDX1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.57■□□□□ 0.88
PSD4Q8NDX1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.57■□□□□ 0.88
PSD4Q8NDX1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PSD4Q8NDX1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PSD4Q8NDX1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PSD4Q8NDX1 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PSD4Q8NDX1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PSD4Q8NDX1 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PSD4Q8NDX1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PSD4Q8NDX1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.56■□□□□ 0.88
PSD4Q8NDX1 AF213884.3-201ENST00000563833 479 ntBASIC20.56■□□□□ 0.88
PSD4Q8NDX1 MIR3181-201ENST00000578512 73 ntBASIC20.56■□□□□ 0.88
PSD4Q8NDX1 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
PSD4Q8NDX1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PSD4Q8NDX1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PSD4Q8NDX1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PSD4Q8NDX1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PSD4Q8NDX1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PSD4Q8NDX1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PSD4Q8NDX1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
PSD4Q8NDX1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PSD4Q8NDX1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
PSD4Q8NDX1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.55■□□□□ 0.88
PSD4Q8NDX1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.55■□□□□ 0.88
PSD4Q8NDX1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.55■□□□□ 0.88
PSD4Q8NDX1 AP001330.3-201ENST00000520123 633 ntBASIC20.55■□□□□ 0.88
PSD4Q8NDX1 AC136469.2-201ENST00000623944 1028 ntBASIC20.55■□□□□ 0.88
PSD4Q8NDX1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PSD4Q8NDX1 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PSD4Q8NDX1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PSD4Q8NDX1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PSD4Q8NDX1 AC233723.2-201ENST00000623798 2106 ntBASIC20.54■□□□□ 0.88
PSD4Q8NDX1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PSD4Q8NDX1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
PSD4Q8NDX1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PSD4Q8NDX1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PSD4Q8NDX1 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PSD4Q8NDX1 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PSD4Q8NDX1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
PSD4Q8NDX1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PSD4Q8NDX1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PSD4Q8NDX1 MIR935-201ENST00000401179 91 ntBASIC20.54■□□□□ 0.88
PSD4Q8NDX1 MIR939-201ENST00000401314 82 ntBASIC20.54■□□□□ 0.88
PSD4Q8NDX1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.54■□□□□ 0.88
PSD4Q8NDX1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.54■□□□□ 0.88
PSD4Q8NDX1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.54■□□□□ 0.88
PSD4Q8NDX1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.54■□□□□ 0.88
PSD4Q8NDX1 pRNA.6-201ENST00000610482 90 ntBASIC20.54■□□□□ 0.88
PSD4Q8NDX1 pRNA.5-201ENST00000612139 90 ntBASIC20.54■□□□□ 0.88
PSD4Q8NDX1 pRNA.11-201ENST00000618423 90 ntBASIC20.54■□□□□ 0.88
PSD4Q8NDX1 pRNA.13-201ENST00000619112 90 ntBASIC20.54■□□□□ 0.88
PSD4Q8NDX1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PSD4Q8NDX1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PSD4Q8NDX1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.54■□□□□ 0.88
PSD4Q8NDX1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.54■□□□□ 0.88
PSD4Q8NDX1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PSD4Q8NDX1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PSD4Q8NDX1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PSD4Q8NDX1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.53■□□□□ 0.88
PSD4Q8NDX1 ANOS2P-203ENST00000472227 1816 ntBASIC20.53■□□□□ 0.88
PSD4Q8NDX1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PSD4Q8NDX1 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PSD4Q8NDX1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PSD4Q8NDX1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PSD4Q8NDX1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.53■□□□□ 0.88
PSD4Q8NDX1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.53■□□□□ 0.88
PSD4Q8NDX1 AL136967.2-201ENST00000623968 743 ntBASIC20.53■□□□□ 0.88
PSD4Q8NDX1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms