Protein–RNA interactions for Protein: Q8N9H8

EXD3, Exonuclease mut-7 homolog, humanhuman

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3Q8N9H8 AL355802.2-201ENST00000402069 882 ntBASIC20.7■□□□□ 0.9
EXD3Q8N9H8 AC016769.1-201ENST00000409132 1010 ntBASIC20.7■□□□□ 0.9
EXD3Q8N9H8 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.7■□□□□ 0.9
EXD3Q8N9H8 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EXD3Q8N9H8 AC137761.2-201ENST00000561729 223 ntBASIC20.7■□□□□ 0.9
EXD3Q8N9H8 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.7■□□□□ 0.9
EXD3Q8N9H8 AC145350.3-201ENST00000569033 163 ntBASIC20.7■□□□□ 0.9
EXD3Q8N9H8 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.7■□□□□ 0.9
EXD3Q8N9H8 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
EXD3Q8N9H8 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
EXD3Q8N9H8 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
EXD3Q8N9H8 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EXD3Q8N9H8 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EXD3Q8N9H8 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.7■□□□□ 0.9
EXD3Q8N9H8 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.7■□□□□ 0.9
EXD3Q8N9H8 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
EXD3Q8N9H8 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EXD3Q8N9H8 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
EXD3Q8N9H8 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.69■□□□□ 0.9
EXD3Q8N9H8 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
EXD3Q8N9H8 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EXD3Q8N9H8 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
EXD3Q8N9H8 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.69■□□□□ 0.9
EXD3Q8N9H8 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
EXD3Q8N9H8 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
EXD3Q8N9H8 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
EXD3Q8N9H8 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.69■□□□□ 0.9
EXD3Q8N9H8 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EXD3Q8N9H8 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EXD3Q8N9H8 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EXD3Q8N9H8 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EXD3Q8N9H8 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.68■□□□□ 0.9
EXD3Q8N9H8 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
EXD3Q8N9H8 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.68■□□□□ 0.9
EXD3Q8N9H8 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EXD3Q8N9H8 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
EXD3Q8N9H8 AL109923.1-201ENST00000618799 583 ntBASIC20.68■□□□□ 0.9
EXD3Q8N9H8 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
EXD3Q8N9H8 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
EXD3Q8N9H8 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
EXD3Q8N9H8 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
EXD3Q8N9H8 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.67■□□□□ 0.9
EXD3Q8N9H8 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
EXD3Q8N9H8 AP005435.1-201ENST00000529293 1178 ntBASIC20.67■□□□□ 0.9
EXD3Q8N9H8 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.67■□□□□ 0.9
EXD3Q8N9H8 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EXD3Q8N9H8 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
EXD3Q8N9H8 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
EXD3Q8N9H8 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.67■□□□□ 0.9
EXD3Q8N9H8 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.67■□□□□ 0.9
EXD3Q8N9H8 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EXD3Q8N9H8 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
EXD3Q8N9H8 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EXD3Q8N9H8 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EXD3Q8N9H8 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.66■□□□□ 0.9
EXD3Q8N9H8 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.66■□□□□ 0.9
EXD3Q8N9H8 AC010525.1-201ENST00000585559 441 ntBASIC20.66■□□□□ 0.9
EXD3Q8N9H8 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.66■□□□□ 0.9
EXD3Q8N9H8 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.66■□□□□ 0.9
EXD3Q8N9H8 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EXD3Q8N9H8 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EXD3Q8N9H8 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.66■□□□□ 0.9
EXD3Q8N9H8 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EXD3Q8N9H8 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EXD3Q8N9H8 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EXD3Q8N9H8 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.65■□□□□ 0.9
EXD3Q8N9H8 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EXD3Q8N9H8 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.65■□□□□ 0.9
EXD3Q8N9H8 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EXD3Q8N9H8 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EXD3Q8N9H8 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.65■□□□□ 0.9
EXD3Q8N9H8 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EXD3Q8N9H8 CROCCP5-201ENST00000436658 830 ntBASIC20.65■□□□□ 0.9
EXD3Q8N9H8 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.65■□□□□ 0.9
EXD3Q8N9H8 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EXD3Q8N9H8 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.65■□□□□ 0.9
EXD3Q8N9H8 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
EXD3Q8N9H8 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
EXD3Q8N9H8 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
EXD3Q8N9H8 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
EXD3Q8N9H8 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.64■□□□□ 0.89
EXD3Q8N9H8 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
EXD3Q8N9H8 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.64■□□□□ 0.89
EXD3Q8N9H8 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
EXD3Q8N9H8 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
EXD3Q8N9H8 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.64■□□□□ 0.89
EXD3Q8N9H8 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
EXD3Q8N9H8 AC006970.2-201ENST00000450065 779 ntBASIC20.64■□□□□ 0.89
EXD3Q8N9H8 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.64■□□□□ 0.89
EXD3Q8N9H8 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.64■□□□□ 0.89
EXD3Q8N9H8 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EXD3Q8N9H8 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
EXD3Q8N9H8 AC133637.1-201ENST00000624115 1537 ntBASIC20.63■□□□□ 0.89
EXD3Q8N9H8 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EXD3Q8N9H8 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EXD3Q8N9H8 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.63■□□□□ 0.89
EXD3Q8N9H8 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EXD3Q8N9H8 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
EXD3Q8N9H8 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
EXD3Q8N9H8 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms